Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis regifaucium |
| Strain | strain GY080 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis regifaucium strain GY080 contig_9, whole genome
Gene Summary
Adenine Count
1297563 bp
Thymine Count
1308061 bp
Guanine Count
2831240 bp
Cytosine Count
2836058 bp
Genome Length
8273016 bp
Protein-coding Genes
7375 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AVL48_37875 | Not Available | Positive | 6637051 - 6638070 | 36612.9 |
| hypothetical protein | AVL48_37880 | Not Available | Positive | 6638067 - 6639020 | 32868.2 |
| hypothetical protein | AVL48_37890 | Not Available | Negative | 6640153 - 6640500 | 12783.9 |
| hypothetical protein | AVL48_37895 | Not Available | Negative | 6640590 - 6640883 | 10549.5 |
| hypothetical protein | AVL48_37900 | Not Available | Negative | 6640919 - 6641248 | 11572.4 |
| choline oxidase | AVL48_11420 | Not Available | Negative | 6642116 - 6643669 | 56530.7 |
| amino acid permease | AVL48_11425 | Not Available | Negative | 6643666 - 6645177 | 54080.7 |
| betaine-aldehyde dehydrogenase | AVL48_11430 | Not Available | Negative | 6645194 - 6646678 | 52903.4 |
| 1-deoxy-d-xylulose-5-phosphate synthase | AVL48_11435 | Not Available | Positive | 6646896 - 6648800 | 67613.0 |
| nitrate reductase | AVL48_11440 | Not Available | Negative | 6649060 - 6650502 | 50809.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
