Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis regifaucium |
| Strain | strain GY080 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis regifaucium strain GY080 contig_9, whole genome
Gene Summary
Adenine Count
1297563 bp
Thymine Count
1308061 bp
Guanine Count
2831240 bp
Cytosine Count
2836058 bp
Genome Length
8273016 bp
Protein-coding Genes
7375 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyldiaminopimelate transaminase | AVL48_10470 | Not Available | Positive | 6361249 - 6362340 | 38433.2 |
| tetr family transcriptional regulator | AVL48_10475 | Not Available | Negative | 6362417 - 6363025 | 22164.0 |
| 3-(3-hydroxyphenyl)propionate hydroxylase | AVL48_10480 | Not Available | Positive | 6363105 - 6364508 | 50180.4 |
| metal-chelation protein chad | AVL48_10485 | Not Available | Negative | 6364484 - 6365455 | 35205.6 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | AVL48_10490 | Not Available | Negative | 6365735 - 6366721 | 33674.0 |
| hypothetical protein | AVL48_10495 | Not Available | Negative | 6366750 - 6367145 | 13440.4 |
| succinyl-diaminopimelate desuccinylase | AVL48_10500 | Not Available | Positive | 6367188 - 6368261 | 37979.2 |
| xre family transcriptional regulator | AVL48_10505 | Not Available | Negative | 6368383 - 6369639 | 44930.6 |
| hypothetical protein | AVL48_10510 | Not Available | Positive | 6370041 - 6375146 | 179406.0 |
| chitinase | AVL48_10515 | Not Available | Negative | 6375197 - 6376252 | 37141.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
