Amycolatopsis regifaucium strain GY080

rodaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis regifaucium strain GY080 is a Gram-positive, aerobic bacterium characterized by its rod shape and non-motile nature. This strain is mesophilic, with an optimal growth temperature of 32°C, indicating that it thrives in moderate temperature environments. Notably, A. regifaucium GY080 is a spore-forming organism, which allows it to survive in adverse conditions by entering a dormant state. The genomic structure of A. regifaucium strain GY080 is noteworthy, possessing two replicons, which may contribute to its adaptability and genetic diversity. The presence of true flagella suggests that the organism has the potential for motility, although it is classified as non-motile in practice. The ability to form spores is significant from a biological perspective, as it enhances the bacterium's survival in fluctuating environmental conditions, thereby playing a crucial role in its ecological success. This trait allows A. regifaucium GY080 to endure periods of nutrient scarcity or other stressors, facilitating its persistence in various habitats. The accessions LOBU00000000.2 and LQCI00000000.1 provide further resources for researchers interested in studying the genetics and potential applications of this organism. Understanding the characteristics of A. regifaucium strain GY080 can contribute to insights into microbial ecology and the roles of such bacteria in their environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis regifaucium
Strainstrain GY080

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Amycolatopsis regifaucium strain GY080
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis regifaucium strain GY080 contig_9, whole genome

Gene Summary

Adenine Count

1297563 bp

Thymine Count

1308061 bp

Guanine Count

2831240 bp

Cytosine Count

2836058 bp

Genome Length

8273016 bp

Protein-coding Genes

7375 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methionine synthaseAVL48_05875Not AvailableNegative5447716 - 544875336187.6
scramblaseAVL48_05880Not AvailablePositive5448874 - 544968029800.4
mbl fold metallo-hydrolaseAVL48_05885Not AvailablePositive5449859 - 545089638112.5
gnat family acetyltransferaseAVL48_05890Not AvailablePositive5450893 - 545133616143.4
trna(5-methylaminomethyl-2-thiouridylate)- methyltransferaseAVL48_05895Not AvailableNegative5451409 - 545250038535.8
cysteine desulfuraseAVL48_05900Not AvailableNegative5452506 - 545370241489.2
mfs transporterAVL48_05905Not AvailableNegative5453749 - 545513146785.3
helix-turn-helix transcriptional regulatorAVL48_05910Not AvailableNegative5455165 - 545643344898.9
nadph:quinone reductaseAVL48_05915Not AvailablePositive5456569 - 545745930236.7
acyl-phosphate glycerol 3-phosphate acyltransferaseAVL48_05920Not AvailableNegative5457685 - 545859932275.1

Displaying genes 4901 – 4910 of 14906 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.