Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis regifaucium |
| Strain | strain GY080 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis regifaucium strain GY080 contig_9, whole genome
Gene Summary
Adenine Count
1297563 bp
Thymine Count
1308061 bp
Guanine Count
2831240 bp
Cytosine Count
2836058 bp
Genome Length
8273016 bp
Protein-coding Genes
7375 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoadipate enol-lactonase | AVL48_04820 | Not Available | Negative | 5221314 - 5222093 | 27391.7 |
| protocatechuate 3,4-dioxygenase subunit alpha | AVL48_04825 | Not Available | Negative | 5222086 - 5222634 | 19401.6 |
| protocatechuate 3,4-dioxygenase subunit beta | AVL48_04830 | Not Available | Negative | 5222634 - 5223368 | 27708.4 |
| beta-ketoadipyl coa thiolase | AVL48_04835 | Not Available | Negative | 5223397 - 5224575 | 40840.5 |
| 3-oxoadipate--succinyl-coa transferase | AVL48_04840 | Not Available | Negative | 5224572 - 5225327 | 26296.5 |
| 3-oxoadipate--succinyl-coa transferase | AVL48_04845 | Not Available | Negative | 5225324 - 5226133 | 29067.6 |
| d-glycerate dehydrogenase | AVL48_04855 | Not Available | Positive | 5226920 - 5227885 | 33901.9 |
| glycerate kinase | AVL48_04860 | Not Available | Positive | 5227882 - 5229009 | 37394.4 |
| iron-sulfur cluster biosynthesis protein | AVL48_04865 | Not Available | Negative | 5229170 - 5229475 | 10386.1 |
| hypothetical protein | AVL48_04870 | Not Available | Negative | 5229557 - 5229772 | 7946.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
