Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis regifaucium |
| Strain | strain GY080 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis regifaucium strain GY080 contig_9, whole genome
Gene Summary
Adenine Count
1297563 bp
Thymine Count
1308061 bp
Guanine Count
2831240 bp
Cytosine Count
2836058 bp
Genome Length
8273016 bp
Protein-coding Genes
7375 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | AVL48_04665 | Not Available | Negative | 5186066 - 5186461 | 14315.2 |
| dehydrogenase | AVL48_04675 | Not Available | Negative | 5190875 - 5191876 | 34561.9 |
| laci family transcriptional regulator | AVL48_04680 | Not Available | Negative | 5191890 - 5192888 | 35438.6 |
| inosose dehydratase | AVL48_04685 | Not Available | Positive | 5193024 - 5193914 | 31515.6 |
| sugar abc transporter substrate-binding protein | AVL48_04690 | Not Available | Positive | 5193938 - 5194924 | 34034.2 |
| ribose abc transporter permease | AVL48_04695 | Not Available | Positive | 5194921 - 5195955 | 36515.2 |
| sugar abc transporter atp-binding protein | AVL48_04700 | Not Available | Positive | 5195952 - 5196752 | 28586.5 |
| 5-dehydro-2-deoxygluconokinase | AVL48_04705 | Not Available | Positive | 5196749 - 5197681 | 32589.0 |
| 5-deoxy-glucuronate isomerase | AVL48_04710 | Not Available | Positive | 5197678 - 5198568 | 32610.1 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | AVL48_04715 | Not Available | Positive | 5198532 - 5200403 | 66422.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
