Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis regifaucium |
| Strain | strain GY080 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis regifaucium strain GY080 contig_9, whole genome
Gene Summary
Adenine Count
1297563 bp
Thymine Count
1308061 bp
Guanine Count
2831240 bp
Cytosine Count
2836058 bp
Genome Length
8273016 bp
Protein-coding Genes
7375 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease proteolytic subunit | AVL48_36355 | Not Available | Negative | 4623036 - 4623707 | 24839.6 |
| atp-dependent clp protease proteolytic subunit | AVL48_36360 | Not Available | Negative | 4623735 - 4624337 | 21875.8 |
| trigger factor | AVL48_36365 | Not Available | Negative | 4624544 - 4625914 | 50420.7 |
| phenylacetic acid degradation protein | AVL48_36370 | Not Available | Positive | 4626378 - 4628399 | 74984.1 |
| glycosyl transferase | AVL48_36380 | Not Available | Positive | 4630336 - 4632147 | 61723.9 |
| sugar translocase | AVL48_36385 | Not Available | Positive | 4632222 - 4633481 | 45063.0 |
| glycosyl transferase | AVL48_36390 | Not Available | Positive | 4633486 - 4635345 | 63888.6 |
| integrase | AVL48_36395 | Not Available | Negative | 4635902 - 4636870 | 36828.4 |
| udp-n-acetylglucosamine 2-epimerase | AVL48_03415 | Not Available | Negative | 4649579 - 4650691 | 41373.1 |
| glycosyl transferase | AVL48_03420 | Not Available | Positive | 4650753 - 4651769 | 36269.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
