Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis regifaucium |
| Strain | strain GY080 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis regifaucium strain GY080 contig_9, whole genome
Gene Summary
Adenine Count
1297563 bp
Thymine Count
1308061 bp
Guanine Count
2831240 bp
Cytosine Count
2836058 bp
Genome Length
8273016 bp
Protein-coding Genes
7375 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter permease | AVL48_33800 | Not Available | Negative | 4096688 - 4097554 | 31543.7 |
| sugar transporter | AVL48_33805 | Not Available | Negative | 4097545 - 4098504 | 34752.7 |
| abc transporter substrate-binding protein | AVL48_33810 | Not Available | Negative | 4098505 - 4099788 | 44413.8 |
| 3-carboxymuconate cyclase | AVL48_33815 | Not Available | Negative | 4099801 - 4100931 | 39353.5 |
| permease | AVL48_33820 | Not Available | Negative | 4100959 - 4102347 | 46980.2 |
| n-acyl-d-amino-acid deacylase | AVL48_33825 | Not Available | Negative | 4102344 - 4103939 | 56795.9 |
| amino acid deaminase | AVL48_33830 | Not Available | Negative | 4103973 - 4105277 | 46855.6 |
| sugar kinase | AVL48_33835 | Not Available | Positive | 4105428 - 4106369 | 32311.5 |
| iclr family transcriptional regulator | AVL48_33840 | Not Available | Positive | 4106366 - 4107130 | 27859.2 |
| reactive intermediate/imine deaminase | AVL48_33845 | Not Available | Positive | 4107127 - 4107510 | 13334.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
