Amycolatopsis regifaucium strain GY080

rodaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis regifaucium strain GY080 is a Gram-positive, aerobic bacterium characterized by its rod shape and non-motile nature. This strain is mesophilic, with an optimal growth temperature of 32°C, indicating that it thrives in moderate temperature environments. Notably, A. regifaucium GY080 is a spore-forming organism, which allows it to survive in adverse conditions by entering a dormant state. The genomic structure of A. regifaucium strain GY080 is noteworthy, possessing two replicons, which may contribute to its adaptability and genetic diversity. The presence of true flagella suggests that the organism has the potential for motility, although it is classified as non-motile in practice. The ability to form spores is significant from a biological perspective, as it enhances the bacterium's survival in fluctuating environmental conditions, thereby playing a crucial role in its ecological success. This trait allows A. regifaucium GY080 to endure periods of nutrient scarcity or other stressors, facilitating its persistence in various habitats. The accessions LOBU00000000.2 and LQCI00000000.1 provide further resources for researchers interested in studying the genetics and potential applications of this organism. Understanding the characteristics of A. regifaucium strain GY080 can contribute to insights into microbial ecology and the roles of such bacteria in their environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis regifaucium
Strainstrain GY080

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Amycolatopsis regifaucium strain GY080
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis regifaucium strain GY080 contig_9, whole genome

Gene Summary

Adenine Count

1297563 bp

Thymine Count

1308061 bp

Guanine Count

2831240 bp

Cytosine Count

2836058 bp

Genome Length

8273016 bp

Protein-coding Genes

7375 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramate--alanine ligaseAVL48_33080Not AvailableNegative3948869 - 395027848796.7
udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferaseAVL48_33085Not AvailableNegative3950271 - 395139538373.9
cell division protein ftswAVL48_33090Not AvailableNegative3951392 - 395287352575.5
udp-n-acetylmuramoylalanine--d-glutamate ligaseAVL48_33095Not AvailableNegative3952860 - 395426348307.2
phospho-n-acetylmuramoyl-pentapeptide- transferaseAVL48_33100Not AvailableNegative3954267 - 395535238222.4
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseAVL48_33105Not AvailableNegative3955349 - 395688152342.2
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseAVL48_33110Not AvailableNegative3956878 - 395838351984.0
cell division protein ftsiAVL48_33115Not AvailableNegative3958867 - 396079568561.7
hypothetical proteinAVL48_33120Not AvailableNegative3960795 - 396151124972.6
ribosomal rna small subunit methyltransferase hAVL48_33125Not AvailableNegative3961508 - 396246735054.0

Displaying genes 3551 – 3560 of 14906 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.