Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis regifaucium |
| Strain | strain GY080 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis regifaucium strain GY080 contig_9, whole genome
Gene Summary
Adenine Count
1297563 bp
Thymine Count
1308061 bp
Guanine Count
2831240 bp
Cytosine Count
2836058 bp
Genome Length
8273016 bp
Protein-coding Genes
7375 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxylate carboligase | AVL48_28950 | Not Available | Negative | 2668828 - 2670504 | 60636.6 |
| 2-hydroxy-3-oxopropionate reductase | AVL48_28955 | Not Available | Negative | 2670526 - 2671413 | 29568.8 |
| hydroxypyruvate isomerase | AVL48_28960 | Not Available | Negative | 2671410 - 2672237 | 29474.7 |
| epoxide hydrolase | AVL48_28965 | Not Available | Positive | 2672396 - 2673550 | 43153.3 |
| acetyltransferase | AVL48_28975 | Not Available | Positive | 2674277 - 2674843 | 20448.2 |
| lysine transporter lyse | AVL48_28980 | Not Available | Positive | 2674840 - 2675466 | 21614.4 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase | AVL48_28985 | Not Available | Negative | 2675492 - 2676550 | 37888.5 |
| hypothetical protein | AVL48_28990 | Not Available | Positive | 2676794 - 2677060 | 9618.09 |
| dehydrogenase | AVL48_28995 | Not Available | Positive | 2677121 - 2677546 | 15455.3 |
| dna polymerase iv | AVL48_29000 | Not Available | Positive | 2677556 - 2678608 | 37415.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
