Amycolatopsis regifaucium strain GY080

rodaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis regifaucium strain GY080 is a Gram-positive, aerobic bacterium characterized by its rod shape and non-motile nature. This strain is mesophilic, with an optimal growth temperature of 32°C, indicating that it thrives in moderate temperature environments. Notably, A. regifaucium GY080 is a spore-forming organism, which allows it to survive in adverse conditions by entering a dormant state. The genomic structure of A. regifaucium strain GY080 is noteworthy, possessing two replicons, which may contribute to its adaptability and genetic diversity. The presence of true flagella suggests that the organism has the potential for motility, although it is classified as non-motile in practice. The ability to form spores is significant from a biological perspective, as it enhances the bacterium's survival in fluctuating environmental conditions, thereby playing a crucial role in its ecological success. This trait allows A. regifaucium GY080 to endure periods of nutrient scarcity or other stressors, facilitating its persistence in various habitats. The accessions LOBU00000000.2 and LQCI00000000.1 provide further resources for researchers interested in studying the genetics and potential applications of this organism. Understanding the characteristics of A. regifaucium strain GY080 can contribute to insights into microbial ecology and the roles of such bacteria in their environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis regifaucium
Strainstrain GY080

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Amycolatopsis regifaucium strain GY080
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis regifaucium strain GY080 contig_9, whole genome

Gene Summary

Adenine Count

1297563 bp

Thymine Count

1308061 bp

Guanine Count

2831240 bp

Cytosine Count

2836058 bp

Genome Length

8273016 bp

Protein-coding Genes

7375 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAVL48_00810Not AvailableNegative180026 - 1802387506.15
fad-linked oxidaseAVL48_00815Not AvailableNegative180292 - 18165947556.0
xre family transcriptional regulatorAVL48_00820Not AvailablePositive181967 - 18256621312.3
fad-dependent oxidoreductaseAVL48_00825Not AvailablePositive182646 - 18382440335.2
proline dehydrogenaseAVL48_00830Not AvailablePositive183821 - 18412910758.8
fad/nad(p)-binding oxidoreductaseAVL48_00835Not AvailablePositive184126 - 18549347899.3
dihydrodipicolinate synthase family proteinAVL48_00840Not AvailablePositive185490 - 18640132187.2
proline racemaseAVL48_00845Not AvailablePositive186402 - 18740335895.0
peptidase m38AVL48_00850Not AvailableNegative187473 - 18868742759.5
gaf sensor proteinAVL48_00855Not AvailableNegative188684 - 18912115729.7

Displaying genes 161 – 170 of 14906 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.