Amycolatopsis regifaucium strain GY080

rodaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis regifaucium strain GY080 is a Gram-positive, aerobic bacterium characterized by its rod shape and non-motile nature. This strain is mesophilic, with an optimal growth temperature of 32°C, indicating that it thrives in moderate temperature environments. Notably, A. regifaucium GY080 is a spore-forming organism, which allows it to survive in adverse conditions by entering a dormant state. The genomic structure of A. regifaucium strain GY080 is noteworthy, possessing two replicons, which may contribute to its adaptability and genetic diversity. The presence of true flagella suggests that the organism has the potential for motility, although it is classified as non-motile in practice. The ability to form spores is significant from a biological perspective, as it enhances the bacterium's survival in fluctuating environmental conditions, thereby playing a crucial role in its ecological success. This trait allows A. regifaucium GY080 to endure periods of nutrient scarcity or other stressors, facilitating its persistence in various habitats. The accessions LOBU00000000.2 and LQCI00000000.1 provide further resources for researchers interested in studying the genetics and potential applications of this organism. Understanding the characteristics of A. regifaucium strain GY080 can contribute to insights into microbial ecology and the roles of such bacteria in their environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis regifaucium
Strainstrain GY080

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Amycolatopsis regifaucium strain GY080
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis regifaucium strain GY080 contig_9, whole genome

Gene Summary

Adenine Count

1297563 bp

Thymine Count

1308061 bp

Guanine Count

2831240 bp

Cytosine Count

2836058 bp

Genome Length

8273016 bp

Protein-coding Genes

7375 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna replication/repair protein recfATP06_0232200Not AvailableNegative6934712 - 693586641589.0
6-phosphogluconate dehydrogenase (decarboxylating)ATP06_0232205Not AvailableNegative6935893 - 693678031678.6
dna polymerase iii subunit betaATP06_0232210Not AvailableNegative6936817 - 693795039459.1
chromosomal replication initiation protein dnaaATP06_0232215Not AvailableNegative6938872 - 694050960753.1
50s ribosomal protein l34ATP06_0232220Not AvailablePositive6941115 - 69412585447.82
ribonuclease p protein componentATP06_0232225Not AvailablePositive6941282 - 694169214363.4
membrane protein insertion efficiency factor yiddATP06_0232230Not AvailablePositive6941697 - 694200211348.7
membrane protein insertase yidcATP06_0232235Not AvailablePositive6942007 - 694310740691.5
single-stranded dna-binding proteinATP06_0232240Not AvailablePositive6943138 - 694369520219.5
16s rrna (guanine(527)-n(7))-methyltransferase rsmgATP06_0232245Not AvailablePositive6943905 - 694458524323.5

Displaying genes 13711 – 13720 of 14906 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.