Vibrio cidicii strain 2538-88

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cidicii strain 2538-88 is a Gram-negative, rod-shaped bacterium. This strain is characterized by its distinctive shape and staining properties, which are typical of the Vibrio genus. Gram-negative bacteria are recognized for their complex cell wall structure, which includes an outer membrane containing lipopolysaccharides, contributing to their resilience in various environments. While specific metabolic capabilities, growth conditions, and ecological roles of Vibrio cidicii strain 2538-88 are not detailed here, the presence of its genus suggests potential adaptations to aquatic environments, as members commonly inhabit marine and estuarine ecosystems. Vibrio species are often associated with nutrient-rich environments, which may enhance their growth and survival. The rod shape of Vibrio cidicii strain 2538-88 may confer advantages in motility and nutrient uptake, allowing for efficient movement and interaction with its surroundings. This morphological trait is typical of many bacteria in aquatic environments, where the ability to navigate through liquid media can be critical for colonization and resource acquisition. Overall, the characteristics of Vibrio cidicii strain 2538-88 suggest a potential role in the microbial dynamics of its natural habitat, likely influencing nutrient cycling and microbial community structure. Understanding its specific ecological interactions would require further investigation into its metabolic pathways and behaviors within its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cidicii
Strainstrain 2538-88

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio cidicii strain 2538-88
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio cidicii strain 2538-88


Gene Summary

Adenine Count

1202253 bp

Thymine Count

1198130 bp

Guanine Count

1089160 bp

Cytosine Count

1123769 bp

Genome Length

4619449 bp

Protein-coding Genes

3950 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinATY37_00010Not Available+276 - 4918680.79
hypothetical proteinATY37_00015Not Available+812 - 9946891.1
dna-binding proteinATY37_00020Not Available+1056 - 145114089.0
dienelactone hydrolaseATY37_00025Not Available-1518 - 242333268.2
hypothetical proteinATY37_00030Not Available-2537 - 299216991.2
chemotaxis proteinATY37_00035Not Available-3123 - 501268017.2
chemotaxis proteinATY37_00040Not Available-5198 - 708467033.0
chemotaxis response regulator protein-glutamate methylesteraseATY37_02080Not Available+7432 - 827129227.7
ribosomal-protein-l7/l12-serine acetyltransferaseATY37_02085Not Available+8487 - 902620309.3
2-hydroxy-3-oxopropionate reductaseATY37_02090Not Available-9069 - 994431041.3

Displaying genes 1 – 10 of 3950 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites