Vibrio toranzoniae strain Vb 10.8

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio toranzoniae strain Vb 10.8 is characterized by possessing a single replicon, which is significant for its genetic structure and replication mechanisms. The strain is cataloged under the accession number LMXU00000000.1, indicating its entry into genomic databases for further research and characterization. As a member of the Vibrio genus, V. toranzoniae may be expected to exhibit traits typical of vibrios, such as being a halophilic organism, which often thrives in marine environments. While specific ecological roles or interactions for strain Vb 10.8 are not detailed in the provided data, Vibrio species are known for their diverse roles in aquatic ecosystems, including nutrient cycling and interactions with other marine organisms. The presence of a single replicon suggests a streamlined genomic architecture, which could have implications for its adaptability and survival in specific environments. This trait may also influence its metabolic capabilities and interactions with its surroundings. Understanding the genomic features of V. toranzoniae strain Vb 10.8 can provide insights into its ecological niche and potential applications, such as in biotechnology or environmental monitoring. Overall, the genetic simplicity of Vb 10.8, coupled with its classification within the Vibrio genus, highlights the potential for further exploration of its ecological roles and biotechnological significance in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio toranzoniae
Strainstrain Vb 10.8

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio toranzoniae strain Vb 10.8
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcheese; cheese rind
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio toranzoniae strain Vb 10.8 NContig_138, whole genome

Gene Summary

Adenine Count

1275730 bp

Thymine Count

1268555 bp

Guanine Count

993162 bp

Cytosine Count

999869 bp

Genome Length

4537316 bp

Protein-coding Genes

3857 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAPQ14_05120Not AvailableNegative1428958 - 142960824183.1
glucosaminidaseAPQ14_05125Not AvailableNegative1429730 - 143057831517.1
hypothetical proteinAPQ14_05130Not AvailableNegative1430571 - 143140430541.9
fe3+/spermidine/putrescine abc transporter atp-binding proteinAPQ14_05135Not AvailablePositive1431735 - 143285041954.7
spermidine/putrescine abc transporter permeaseAPQ14_05140Not AvailablePositive1432834 - 143369131697.5
spermidine/putrescine abc transporter permeaseAPQ14_05145Not AvailablePositive1433691 - 143446128006.4
spermidine/putrescine abc transporter substrate-binding proteinAPQ14_05150Not AvailablePositive1434608 - 143564238579.8
spermidine/putrescine abc transporter substrate-binding proteinAPQ14_05155Not AvailablePositive1435870 - 143690739070.2
diguanylate cyclaseAPQ14_05160Not AvailablePositive1437005 - 143779330124.4
nad-dependent deacylaseAPQ14_05165Not AvailableNegative1437914 - 143864827094.9

Displaying genes 1181 – 1190 of 3857 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.