Streptomyces griseorubiginosus strain DSM 40469 PRJNA299230_c063

Gram-positive

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces griseorubiginosus strain DSM 40469 (accession LMWV00000000.1) is a Gram-positive bacterium characterized by the presence of flagella. This trait suggests a potential for motility, which can influence its ecological interactions and distribution in various environments. The strain contains a single replicon, indicating a streamlined genetic structure, which can be advantageous for maintaining genetic stability and efficient replication under specific environmental conditions. Streptomyces species, including S. griseorubiginosus, are well-known for their role in soil ecosystems and their ability to produce a wide range of bioactive compounds, including antibiotics. The presence of flagella may allow S. griseorubiginosus to navigate through soil or aquatic environments, potentially aiding in the colonization of new niches and enhancing its survival and competitiveness in natural habitats. This motility could facilitate interactions with plant roots or other microorganisms, contributing to its ecological role in nutrient cycling and soil health. In summary, the traits of Streptomyces griseorubiginosus strain DSM 40469 highlight its adaptability and potential ecological significance, particularly in its ability to move and thrive in diverse environments, which is crucial for its survival and function in microbial communities.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces griseorubiginosus
Strainstrain DSM 40469 PRJNA299230_c063

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces griseorubiginosus strain DSM 40469 PRJNA299230_c063
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces griseorubiginosus strain DSM 40469 PRJNA299230_c063,

Gene Summary

Adenine Count

1432245 bp

Thymine Count

1434228 bp

Guanine Count

3510883 bp

Cytosine Count

3472793 bp

Genome Length

9850149 bp

Protein-coding Genes

3764 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
molecular chaperone htpgAQJ54_24625Not AvailableNegative333717 - 33554366401.7
hypothetical proteinAQJ54_24630Not AvailableNegative335605 - 33659737011.7
glycogen debranching proteinAQJ54_24635Not AvailableNegative336848 - 33857563143.1
abc transporter permeaseAQJ54_24640Not AvailableNegative338653 - 33946228617.6
abc transporter permeaseAQJ54_24645Not AvailableNegative339459 - 34041534799.7
abc transporter substrate-binding proteinAQJ54_24650Not AvailableNegative340433 - 34168043273.7
laci family transcriptional regulatorAQJ54_24655Not AvailableNegative341789 - 34279935896.6
cellulosome enzymeAQJ54_24660Not AvailablePositive343202 - 346807127556.0
transcriptional regulatorAQJ54_24665Not AvailableNegative346845 - 34783433886.2
formyltetrahydrofolate deformylaseAQJ54_24670Not AvailablePositive348074 - 34894632785.3

Displaying genes 281 – 290 of 3764 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

7 records
Metabolite IDMetabolite nameStructureCAS number
BASm0011719bisucaberinC18H32N4O6Chemical structure of bisucaberinNot available
Average400.476Da
Monoisotopic400.232184766Da
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da
BASm0014614DesmethylenylnocardamineC26H46N6O9Chemical structure of DesmethylenylnocardamineNULL
Average586.687Da
Monoisotopic586.332627085Da
BASm0016716Quinomycin CC51H64N12O12S2Not availableNULL
Average1101.27Da
Monoisotopic1100.420807897Da
BASm0016958Desferrioxamine EC27H48N6O9Chemical structure of Desferrioxamine ENULL
Average600.714Da
Monoisotopic600.34827715Da
BASm0016967Desferrioxamine GC27H50N6O10Chemical structure of Desferrioxamine GNULL
Average618.729Da
Monoisotopic618.358841834Da
BASm0034722LactuloseC12H22O11Chemical structure of LactuloseNULL
Average342.2965Da
Monoisotopic342.116211546Da

Displaying 1–7 of 7 metabolites

Health Effects

No health effects information available for this bacterium.