Streptomyces griseorubiginosus strain DSM 40469 PRJNA299230_c063

Gram-positive

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces griseorubiginosus strain DSM 40469 (PRJNA299230_c063) is a Gram-positive bacterium belonging to the genus Streptomyces, known for its filamentous growth and ability to produce a variety of bioactive compounds. This strain is characterized by its robust mycelial structure, which is indicative of its capability to thrive in diverse environments, often in soil or decaying organic matter. As a member of the Actinobacteria phylum, S. griseorubiginosus contributes significantly to the microbial diversity and biochemical processes within its ecosystem. The Gram-positive nature of this organism suggests a thick peptidoglycan layer in its cell wall, which may contribute to its resilience in various environmental conditions. While specific metabolic pathways and secondary metabolites produced by this strain are not detailed in the provided traits, Streptomyces species are renowned for their ability to synthesize antibiotics and other pharmacologically relevant compounds. This characteristic positions S. griseorubiginosus as a potential candidate for biotechnological applications, particularly in antibiotic discovery. Further exploration of this strain could reveal insights into its ecological role and interactions with other microorganisms in its habitat. Given the well-documented ability of Streptomyces species to degrade complex organic materials, S. griseorubiginosus may play an essential role in nutrient cycling and soil health, highlighting its significance in both environmental microbiology and potential agricultural applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces griseorubiginosus
Strainstrain DSM 40469 PRJNA299230_c063

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Streptomyces griseorubiginosus strain DSM 40469 PRJNA299230_c063
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces griseorubiginosus strain DSM 40469 PRJNA299230_c063


Gene Summary

Adenine Count

1432245 bp

Thymine Count

1434228 bp

Guanine Count

3510883 bp

Cytosine Count

3472793 bp

Genome Length

9850149 bp

Protein-coding Genes

3764 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinAQJ54_23225Not Available+281 - 5689904.53
cellulose biosynthesis protein celdAQJ54_23230Not Available+999 - 213842745.1
hypothetical proteinAQJ54_23235Not Available+2257 - 348645404.1
glyceraldehyde-3-phosphate dehydrogenaseAQJ54_23240Not Available+3563 - 500552384.5
aminotransferase class vAQJ54_23245Not Available-5105 - 633443471.3
hypothetical proteinAQJ54_23250Not Available-6438 - 66356321.35
transcriptional regulatorAQJ54_23255Not Available+7001 - 802636491.3
hypothetical proteinAQJ54_23260Not Available-8003 - 11956142207.0
sugar transporterAQJ54_23265Not Available+12194 - 1349245702.4
arabinose isomeraseAQJ54_23270Not Available+13518 - 1499052944.7

Displaying genes 1 – 10 of 3764 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

7 records
Metabolite IDMetabolite nameStructureCAS number
BASm0011719bisucaberinC18H32N4O6Chemical structure of bisucaberinNot available
Average400.476Da
Monoisotopic400.232184766Da
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da
BASm0014614DesmethylenylnocardamineC26H46N6O9Chemical structure of DesmethylenylnocardamineNULL
Average586.687Da
Monoisotopic586.332627085Da
BASm0016716Quinomycin CC51H64N12O12S2Not availableNULL
Average1101.27Da
Monoisotopic1100.420807897Da
BASm0016958Desferrioxamine EC27H48N6O9Chemical structure of Desferrioxamine ENULL
Average600.714Da
Monoisotopic600.34827715Da
BASm0016967Desferrioxamine GC27H50N6O10Chemical structure of Desferrioxamine GNULL
Average618.729Da
Monoisotopic618.358841834Da
BASm0034722LactuloseC12H22O11Chemical structure of LactuloseNULL
Average342.2965Da
Monoisotopic342.116211546Da

Displaying 1–7 of 7 metabolites