Streptomyces corchorusii strain DSM 40340 PRJNA299223_c116

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces corchorusii strain DSM 40340, with accession number LMWP00000000.1, is a mesophilic bacterium characterized by the presence of flagella. This feature enables the organism to exhibit motility, which can be an important factor in its ecological interactions and nutrient acquisition in the soil environment where it typically resides. The optimal growth temperature for this strain is 29°C, indicating that it thrives in moderately warm conditions. Its temperature range suggests adaptability to various mesophilic environments, which are commonly found in terrestrial ecosystems. This adaptability may facilitate its survival and competitive prowess in diverse habitats, contributing to its ecological role. Streptomyces species, including S. corchorusii, are well known for their ability to produce a wide array of bioactive compounds, including antibiotics and enzymes. This strain's single replicon structure further suggests a streamlined genomic organization, which may play a role in its efficient metabolic processes and adaptability. In summary, the combination of motility, optimal growth temperature, and genomic characteristics positions Streptomyces corchorusii DSM 40340 as a notable microorganism in soil ecology. Its potential for secondary metabolite production, alongside its adaptive traits, underscores its importance in natural ecosystems and potential applications in biotechnology. Understanding such traits can inform further research into harnessing its capabilities for biotechnological innovations or ecological management.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces corchorusii
Strainstrain DSM 40340 PRJNA299223_c116

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces corchorusii strain DSM 40340 PRJNA299223_c116
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces corchorusii strain DSM 40340 PRJNA299223_c116, whole

Gene Summary

Adenine Count

1442067 bp

Thymine Count

1435175 bp

Guanine Count

3705627 bp

Cytosine Count

3702716 bp

Genome Length

10285585 bp

Protein-coding Genes

8634 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
histidine kinaseAQJ11_25900Not AvailablePositive5836093 - 583739446123.8
xre family transcriptional regulatorAQJ11_25905Not AvailablePositive5837391 - 583807125058.4
hypothetical proteinAQJ11_25910Not AvailableNegative5838160 - 583884322098.5
card family transcriptional regulatorAQJ11_25915Not AvailablePositive5839470 - 583995217830.3
2-c-methyl-d-erythritol 4-phosphate cytidylyltransferaseAQJ11_25920Not AvailablePositive5840292 - 584104426249.6
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseAQJ11_25925Not AvailablePositive5841034 - 584153116730.9
pyridoxamine 5'-phosphate oxidaseAQJ11_25930Not AvailablePositive5841589 - 584199315079.8
cysteine--trna ligaseAQJ11_25935Not AvailablePositive5842083 - 584348652149.5
rna methyltransferaseAQJ11_25940Not AvailablePositive5843576 - 584451732789.2
hypothetical proteinAQJ11_25945Not AvailablePositive5844745 - 584635855351.6

Displaying genes 5081 – 5090 of 8738 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.