Streptomyces corchorusii strain DSM 40340 PRJNA299223_c116

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces corchorusii strain DSM 40340, with accession number LMWP00000000.1, is a mesophilic bacterium characterized by the presence of flagella. This feature enables the organism to exhibit motility, which can be an important factor in its ecological interactions and nutrient acquisition in the soil environment where it typically resides. The optimal growth temperature for this strain is 29°C, indicating that it thrives in moderately warm conditions. Its temperature range suggests adaptability to various mesophilic environments, which are commonly found in terrestrial ecosystems. This adaptability may facilitate its survival and competitive prowess in diverse habitats, contributing to its ecological role. Streptomyces species, including S. corchorusii, are well known for their ability to produce a wide array of bioactive compounds, including antibiotics and enzymes. This strain's single replicon structure further suggests a streamlined genomic organization, which may play a role in its efficient metabolic processes and adaptability. In summary, the combination of motility, optimal growth temperature, and genomic characteristics positions Streptomyces corchorusii DSM 40340 as a notable microorganism in soil ecology. Its potential for secondary metabolite production, alongside its adaptive traits, underscores its importance in natural ecosystems and potential applications in biotechnology. Understanding such traits can inform further research into harnessing its capabilities for biotechnological innovations or ecological management.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces corchorusii
Strainstrain DSM 40340 PRJNA299223_c116

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces corchorusii strain DSM 40340 PRJNA299223_c116
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces corchorusii strain DSM 40340 PRJNA299223_c116, whole

Gene Summary

Adenine Count

1442067 bp

Thymine Count

1435175 bp

Guanine Count

3705627 bp

Cytosine Count

3702716 bp

Genome Length

10285585 bp

Protein-coding Genes

8634 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulatorAQJ11_15430Not AvailableNegative3530540 - 353160437353.7
aldo/keto reductaseAQJ11_15435Not AvailablePositive3531708 - 353253830519.2
xre family transcriptional regulatorAQJ11_15440Not AvailableNegative3532592 - 353347031978.9
oxidoreductaseAQJ11_15445Not AvailablePositive3533630 - 353449330732.7
3'-phosphoesteraseAQJ11_15450Not AvailablePositive3534560 - 353517123005.0
cupinAQJ11_15455Not AvailablePositive3535315 - 353574914822.4
pas sensor proteinAQJ11_15460Not AvailableNegative3535750 - 353808082208.4
peroxiredoxinAQJ11_15465Not AvailableNegative3538134 - 353860116931.3
hypothetical proteinAQJ11_15470Not AvailableNegative3538598 - 353897813150.2
hypothetical proteinAQJ11_15475Not AvailablePositive3539195 - 353961414726.6

Displaying genes 3041 – 3050 of 8738 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.