Phycicoccus sp. Soil803

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Intrasporangiaceae

Genus

Phycicoccus

Description

Phycicoccus sp. Soil803 is a bacterial strain characterized by having a single replicon. Its genomic accessions include LMST00000000.1, which signifies its unique identification within biological databases. The single replicon indicates a streamlined genomic organization, which can be advantageous for adaptability and efficiency in various environments, including soil ecosystems. While specific ecological roles or interactions of Phycicoccus sp. Soil803 are not detailed in the provided information, the presence of such bacteria in soil environments often suggests involvement in nutrient cycling and microbial community dynamics. Bacteria in this genus are typically known to contribute to biological processes such as decomposition and organic matter turnover, which are crucial for soil health and fertility. The presence of Phycicoccus sp. Soil803 in soil ecosystems may indicate its role in maintaining microbial diversity and functionality within the soil microbiome. Understanding its genomic structure, as indicated by the single replicon, can shed light on its metabolic capabilities and potential interactions with other microorganisms in the soil. This insight may be significant for future research into soil microbiology, especially regarding the implications of microbial communities on soil quality and sustainability.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyIntrasporangiaceae
GenusPhycicoccus
SpeciesPhycicoccus sp. Soil803
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phycicoccus sp. Soil803 contig_8, whole genome shotgun sequence.

Gene Summary

Adenine Count

657600 bp

Thymine Count

658801 bp

Guanine Count

1578528 bp

Cytosine Count

1572129 bp

Genome Length

4469718 bp

Protein-coding Genes

3962 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
laccaseASG95_12935Not AvailableNegative2813195 - 281392024789.2
cell division protein ftszASG95_12940Not AvailableNegative2814036 - 281528642455.4
hypothetical proteinASG95_12945Not AvailableNegative2815629 - 281639626617.5
udp-n-acetylmuramate--alanine ligaseASG95_12950Not AvailableNegative2816393 - 281782949719.9
udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferaseASG95_12955Not AvailableNegative2817826 - 281894138375.2
cell division protein ftswASG95_12960Not AvailableNegative2818941 - 282022145353.6
udp-n-acetylmuramoylalanine--d-glutamate ligaseASG95_12965Not AvailableNegative2820224 - 282172651862.7
phospho-n-acetylmuramoyl-pentapeptide- transferaseASG95_12970Not AvailableNegative2821705 - 282278738295.7
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseASG95_12975Not AvailableNegative2822784 - 282423249576.8
udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligaseASG95_12980Not AvailableNegative2824229 - 282581254317.9

Displaying genes 2521 – 2530 of 4017 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.