Rhodanobacter sp. Soil772

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Rhodanobacter

Description

Rhodanobacter sp. Soil772 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species is notable for possessing a single replicon, which indicates a streamlined genomic organization typical of many soil-dwelling bacteria. The genome of Rhodanobacter sp. Soil772 is represented by the accession LMSK00000000.1, providing a reference point for future research and comparative studies within the genus Rhodanobacter. Members of the Rhodanobacter genus are known to inhabit various soil environments, where they likely play significant roles in nutrient cycling and soil health. Their Gram-negative classification suggests the presence of a complex outer membrane, which can contribute to their adaptability in diverse ecological niches, particularly in response to environmental stresses such as changes in moisture or nutrient availability. The ecological implications of Rhodanobacter sp. Soil772 may extend to its interactions with other microorganisms and plants in the soil ecosystem. As a bacterium adapted to soil environments, it may participate in processes such as organic matter decomposition and the mineralization of nutrients, thus influencing soil fertility and plant growth. Understanding the specific roles and mechanisms of Rhodanobacter sp. Soil772 could provide insights into its potential applications in agriculture and bioremediation, where enhancing soil health and nutrient availability is essential.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusRhodanobacter
SpeciesRhodanobacter sp. Soil772
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodanobacter sp. Soil772 contig_5, whole genome shotgun sequence.

Gene Summary

Adenine Count

592017 bp

Thymine Count

597410 bp

Guanine Count

1192730 bp

Cytosine Count

1188790 bp

Genome Length

3571513 bp

Protein-coding Genes

3077 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ferredoxinASG75_00910Not AvailableNegative173535 - 17385811970.2
Trna-gluNot AvailableNot AvailablePositive173907 - 173982Not Available
poly(a) polymeraseASG75_00920Not AvailablePositive174175 - 17553050448.9
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinaseASG75_00925Not AvailablePositive175527 - 17600617523.3
3-methyl-2-oxobutanoate hydroxymethyltransferaseASG75_00930Not AvailablePositive176063 - 17689328829.1
pantoate--beta-alanine ligaseASG75_00935Not AvailablePositive176913 - 17775831001.2
aspartate decarboxylaseASG75_00940Not AvailablePositive177859 - 17825114056.7
epoxyqueuosine reductaseASG75_00945Not AvailableNegative178256 - 17932939444.0
carbohydrate kinaseASG75_00950Not AvailablePositive179369 - 18086851476.0
trna threonylcarbamoyladenosine biosynthesis protein tsaeASG75_00955Not AvailablePositive180855 - 18134017215.6

Displaying genes 181 – 190 of 3130 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.