Paenibacillus sp. Soil724D2

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus sp. Soil724D2 is characterized by having a single replicon, which is a notable trait within its genomic structure. The organism is cataloged under the accession number LMRY00000000.1, indicating its unique identification in genomic databases. Paenibacillus species are often found in diverse environments, particularly in soil, where they play significant roles in nutrient cycling and organic matter decomposition. The presence of a single replicon may suggest a streamlined genomic organization, which can be advantageous for adaptation to various environmental conditions. This trait can also influence the organism's metabolic capabilities and its interactions within microbial communities. The ecological significance of Paenibacillus sp. Soil724D2 lies in its potential contributions to soil health and fertility. Members of the Paenibacillus genus are known for their ability to promote plant growth and enhance nutrient availability through their activities, such as nitrogen fixation and the production of biocontrol agents. Therefore, understanding the genomic features and ecological roles of this particular strain can provide insights into its applications in agriculture and environmental management. In summary, Paenibacillus sp. Soil724D2, with its single replicon and specific accession number, exemplifies the complexities of soil microbiota and their essential functions in ecosystem dynamics, particularly concerning nutrient cycling and plant interactions.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus sp. Soil724D2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus sp. Soil724D2


Gene Summary

Adenine Count

2284285 bp

Thymine Count

2308710 bp

Guanine Count

1774233 bp

Cytosine Count

1921686 bp

Genome Length

8289531 bp

Protein-coding Genes

7050 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Terminase small subunitASG85_14220Not AvailablePositive7566576 - 756703417020.3
Terminase large subunitASG85_14225Not AvailablePositive7567037 - 756871664416.6
Putative portal proteinASG85_14230Q9ZXB2Positive7568734 - 756990943911.9
Prohead proteaseASG85_14235Not AvailablePositive7570016 - 757062122657.8
Putative major head proteinASG85_14240Not AvailablePositive7570626 - 757177441052.8
hypothetical proteinASG85_14245Not AvailablePositive7571991 - 757227510727.9
Putative head-tail adaptorASG85_14250Not AvailablePositive7572283 - 757261212506.1
Hypothetical proteinASG85_14255Not AvailablePositive7572612 - 757310918492.2
Hypothetical proteinASG85_14260Not AvailablePositive7573112 - 757348013836.6
Hypothetical proteinASG85_14265Not AvailablePositive7573494 - 757392214528.2

Displaying genes 1 – 10 of 537 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

33 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da
BASm0002963meso-2,6-diaminoheptanedioateC7H14N2O4Chemical structure of meso-2,6-diaminoheptanedioate922-54-3
Average190.1971Da
Monoisotopic190.0953569Da
BASm00030222-methyl-cis-aconitateC7H5O6Chemical structure of 2-methyl-cis-aconitateNot available
Average185.113Da
Monoisotopic185.0102586Da
BASm00031233',5'-cyclic CMPC9H11N3O7PNot availableNot available
Average304.175Da
Monoisotopic304.034010284Da
BASm0003208L-2-acetamido-6-oxoheptanedioateC9H11NO6Chemical structure of L-2-acetamido-6-oxoheptanedioateNot available
Average229.189Da
Monoisotopic229.059734238Da

Displaying 1–10 of 33 metabolites

Health Effects

No health effects information available for this bacterium.