Rhizobium sp. Leaf371

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sp. Leaf371 is a rod-shaped bacterium notable for its motility, as it possesses flagella. This characteristic is significant for its ability to navigate through soil environments, which can enhance its interactions with host plants. The bacterium has a single replicon, indicating a streamlined genomic structure that may contribute to its efficiency in replication and metabolic processes. The genetic information for Rhizobium sp. Leaf371 is cataloged under the accession number LMQB00000000.1, providing a reference for further genomic studies and potential applications in agricultural microbiology. This species is part of the broader Rhizobium genus, which is well-known for its symbiotic relationships with legumes. These relationships are crucial for nitrogen fixation, a process that converts atmospheric nitrogen into a form usable by plants, thereby enriching soil fertility and promoting sustainable agricultural practices. The specific traits of Rhizobium sp. Leaf371, including its motility and genomic organization, may play a role in its efficiency in forming nodules on legume roots, which is essential for its ecological function in nitrogen cycling within ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp. Leaf371
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sp. Leaf371
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sp. Leaf371 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

921660 bp

Thymine Count

930695 bp

Guanine Count

1623764 bp

Cytosine Count

1609567 bp

Genome Length

5085900 bp

Protein-coding Genes

4401 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleoside triphosphate hydrolaseASG39_03460P0AEY4Negative785187 - 78602631470.2
cytidine deaminaseASG39_03465Not AvailableNegative786136 - 78672321991.9
siroheme synthaseASG39_03470Q1H3L5Positive786971 - 78845852448.0
nitrite reductaseASG39_03475Not AvailablePositive788461 - 78877211026.1
sulfite reductaseASG39_03480Q39161Positive789022 - 79069561610.5
oxidoreductaseASG39_03485Not AvailablePositive790697 - 79120918551.9
hypothetical proteinASG39_03490Not AvailableNegative791185 - 79146910567.7
ferredoxin-nadp reductaseASG39_03495Q9L6V3Positive791472 - 79228430110.1
hypothetical proteinASG39_03500P16317Negative792347 - 79456674969.7
abc transporter atp-binding proteinASG39_03505Q52815Negative794894 - 79566428955.5

Displaying genes 701 – 710 of 4462 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

279 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da

Displaying 1–10 of 279 metabolites

Health Effects

No health effects information available for this bacterium.