Methylobacterium sp. Leaf111

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Methylobacteriaceae

Genus

Methylobacterium

Description

Methylobacterium sp. Leaf111 is a rod-shaped bacterium characterized by the presence of flagella, which may contribute to its motility. It possesses a single replicon, indicating a streamlined genomic organization that can be advantageous for efficient replication and adaptation in various environments. The strain is cataloged under accession number LMNE00000000.1, which provides a reference for genetic and taxonomic studies. Methylobacterium species are often associated with plant surfaces and have been studied for their potential role in plant growth promotion. Their ability to colonize plant tissues suggests a symbiotic relationship that may enhance nutrient uptake or offer protective benefits against pathogens. This ecological insight highlights the importance of Methylobacterium sp. Leaf111 in agricultural and environmental contexts, where understanding its interactions with plants could lead to improved sustainable practices. The presence of flagella suggests that Methylobacterium sp. Leaf111 may actively navigate its environment, seeking optimal conditions for colonization and growth.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyMethylobacteriaceae
GenusMethylobacterium
SpeciesMethylobacterium sp. Leaf111
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Methylobacterium sp. Leaf111
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylobacterium sp. Leaf111 contig_9, whole genome shotgun

Gene Summary

Adenine Count

800729 bp

Thymine Count

794525 bp

Guanine Count

1786320 bp

Cytosine Count

1784334 bp

Genome Length

5166228 bp

Protein-coding Genes

4423 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter substrate-binding proteinASF41_10065Not AvailablePositive4107682 - 410895646566.8
abc transporter permeaseASF41_10070P0AFK4Positive4109027 - 410997734488.1
abc transporter permeaseASF41_10075Not AvailablePositive4109980 - 411087031754.2
hypothetical proteinASF41_10080Not AvailablePositive4111000 - 411132311853.8
peptide abc transporter atp-binding proteinASF41_10085Q53193Negative4111373 - 411239836524.6
dipeptide/oligopeptide/nickel abc transporter atp-binding proteinASF41_10090Q53194Negative4112395 - 411345637845.0
abc transporter permeaseASF41_10095Q6D3B2Negative4113453 - 411438232329.4
abc transporter permeaseASF41_10100Q8X6V7Negative4114382 - 411533534021.5
abc transporter substrate-binding proteinASF41_10105P06202Negative4115513 - 411712959455.1
tonb-dependent receptorASF41_10110Not AvailableNegative4117448 - 411980283027.6

Displaying genes 3571 – 3580 of 4485 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

284 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 284 metabolites

Health Effects

No health effects information available for this bacterium.