Acidovorax sp. Leaf78

Gram-negativeBacilli

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Acidovorax

Description

Acidovorax sp. Leaf78 is a Gram-negative bacterium characterized by its bacilli shape and the presence of flagella, which likely contributes to its motility. It has a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. The strain is cataloged under the accession number LMLZ00000000.1, which provides a reference for further genetic and biochemical analysis. As a member of the Acidovorax genus, this bacterium is known for its potential roles in environmental processes, particularly in the degradation of organic compounds. The presence of flagella suggests that Acidovorax sp. Leaf78 may be capable of actively migrating toward nutrient sources or away from unfavorable conditions, which could enhance its survival and ecological competitiveness. The specific traits of Acidovorax sp. Leaf78, including its Gram-negative status and motility, suggest that it may play a significant role in nutrient cycling within its ecological niche. Understanding its functional capabilities could provide insights into its contributions to soil health and ecosystem dynamics, particularly in relation to organic matter decomposition and nutrient availability. Further research on this strain may elucidate its specific interactions with other microorganisms and its overall impact on environmental sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusAcidovorax
SpeciesAcidovorax sp. Leaf78
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Acidovorax sp. Leaf78
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acidovorax sp. Leaf78 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

967880 bp

Thymine Count

970082 bp

Guanine Count

1918546 bp

Cytosine Count

1892787 bp

Genome Length

5749411 bp

Protein-coding Genes

4866 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
radical sam proteinASF16_11675P9WL78Negative4101332 - 410250743536.9
lysr family transcriptional regulatorASF16_11680Q9EXL7Negative4102570 - 410347834299.0
benzoylformate decarboxylaseASF16_11685Q9HUR2Positive4103536 - 410513156885.5
abc transporter substrate-binding proteinASF16_11690Not AvailablePositive4105222 - 410622034692.2
nucleoside diphosphate kinase regulatorASF16_11695P0AFW6Positive4106327 - 410674014677.7
hypothetical proteinASF16_11700Not AvailablePositive4106837 - 410724415725.0
acyltransferaseASF16_11705Not AvailableNegative4107261 - 410837939847.6
arsr family transcriptional regulatorASF16_11710Q58958Positive4108614 - 410919822548.2
cytochrome d ubiquinol oxidase subunit iASF16_11715P0ABK0Positive4109203 - 411058250174.0
cytochrome bd ubiquinol oxidase subunit iiASF16_11720P26458Positive4110593 - 411160036267.6

Displaying genes 3541 – 3550 of 4939 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

289 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000288aminohydroquinoneC6H7NO2Chemical structure of aminohydroquinoneNot available
Average125.127Da
Monoisotopic125.0476785Da

Displaying 1–10 of 289 metabolites

Health Effects

No health effects information available for this bacterium.