Acidovorax sp. Leaf76

Gram-negativeBacilli

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Acidovorax

Description

Acidovorax sp. Leaf76 is a Gram-negative bacterium characterized by its bacilli shape and motility provided by flagella. This organism possesses a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and growth. The availability of its genomic data under the accession number LMLY00000000.1 allows for further analysis and potential applications in microbiological research. As a member of the Acidovorax genus, Acidovorax sp. Leaf76 likely plays a role in various ecological niches, particularly in environments rich in organic matter, where it may contribute to the decomposition of organic substances and the cycling of nutrients. Understanding the ecological functions of such bacteria can provide insights into their potential applications in bioremediation and agricultural practices, where they may enhance soil health or assist in the breakdown of pollutants. The traits of Acidovorax sp. Leaf76 highlight its significance in microbial ecology and its potential utility in biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusAcidovorax
SpeciesAcidovorax sp. Leaf76
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Acidovorax sp. Leaf76
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acidovorax sp. Leaf76 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

972378 bp

Thymine Count

975279 bp

Guanine Count

1958576 bp

Cytosine Count

1963828 bp

Genome Length

5870153 bp

Protein-coding Genes

4936 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid abc transporter permeaseASF11_01235Not AvailablePositive299201 - 29998327869.4
peptide abc transporter atp-binding proteinASF11_01240Not AvailablePositive299980 - 30072627441.2
porinASF11_01245Not AvailablePositive300775 - 30207647250.8
hypothetical proteinASF11_01250Not AvailablePositive302276 - 30317532046.0
penicillin-binding protein 2ASF11_01255P44469Negative303472 - 30541270514.1
rod shape-determining protein mredASF11_01260Not AvailableNegative305564 - 30608218864.0
rod shape-determining protein mrecASF11_01265Not AvailableNegative306168 - 30709133279.4
rod shape-determining protein mrebASF11_01270P0A9X5Negative307264 - 30830736812.9
glutamyl-trna amidotransferaseASF11_01275A1TIW2Positive308512 - 30881110820.0
glutamyl-trna amidotransferaseASF11_01280Q21RH9Positive308823 - 31032552538.4

Displaying genes 281 – 290 of 5019 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

296 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000288aminohydroquinoneC6H7NO2Chemical structure of aminohydroquinoneNot available
Average125.127Da
Monoisotopic125.0476785Da

Displaying 1–10 of 296 metabolites

Health Effects

No health effects information available for this bacterium.