Pseudomonas sp. Leaf48

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. Leaf48 is characterized by having a single replicon, which is a notable trait for this bacterium. The genomic data for this strain is cataloged under the accession number LMLH00000000.1, indicating its sequence is available for further study. Pseudomonas species are known for their metabolic diversity and ability to thrive in various environments. This particular strain, Leaf48, may possess traits typical of Pseudomonas, potentially including the ability to degrade organic compounds and adapt to different ecological niches. These capabilities often allow Pseudomonas species to play significant roles in bioremediation and plant interactions. Understanding the genomic characteristics of Pseudomonas sp. Leaf48 contributes to knowledge in microbiology, particularly regarding the ecological roles of Pseudomonas in soil and plant systems. Their presence in these environments can influence nutrient cycling and plant health, highlighting the importance of studying specific strains like Leaf48 in both ecological and agricultural contexts. The single replicon structure may also suggest a streamlined genomic organization, which could be advantageous for rapid adaptation to environmental changes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. Leaf48
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. Leaf48
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. Leaf48 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1143169 bp

Thymine Count

1164195 bp

Guanine Count

1705808 bp

Cytosine Count

1675991 bp

Genome Length

5689447 bp

Protein-coding Genes

4899 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysr family transcriptional regulatorASE98_14825Not AvailableNegative5637667 - 563855432942.8
peptidoglycan-binding protein lysmASE98_14830Not AvailablePositive5638690 - 563913915944.1
haloacid dehalogenaseASE98_14835Not AvailableNegative5639282 - 563994425192.0
adp-ribose diphosphataseASE98_14840Not AvailablePositive5640033 - 564059920794.1
3'(2'),5'-bisphosphate nucleotidase cysqASE98_14845Not AvailablePositive5640596 - 564142329078.6
thioesteraseASE98_14850Not AvailableNegative5641461 - 564191617088.6
fis family transcriptional regulatorASE98_14855Not AvailableNegative5641957 - 564335150819.1
atpaseASE98_14860Not AvailableNegative5643348 - 564515666586.4
dtdp-4-dehydrorhamnose 3,5-epimeraseASE98_14865Not AvailableNegative5645248 - 564579320656.1
hypothetical proteinASE98_14870Not AvailablePositive5645968 - 5648880105864.0

Displaying genes 4971 – 4980 of 5023 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.