Microbacterium sp. Leaf203

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Microbacterium

Description

Microbacterium sp. Leaf203 is characterized by its rod-shaped morphology, which is typical for members of the genus Microbacterium. This microorganism possesses a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability in various environments. The genomic data for this strain can be accessed through the accession number LMKF00000000.1, providing a resource for further study and exploration of its genetic characteristics. Microbacterium species are known for their ecological versatility, often found in soil, water, and plant environments. The specific identification of Microbacterium sp. Leaf203 suggests its potential role in plant-associated microbiomes, where it may interact with plant roots or contribute to nutrient cycling. Understanding the traits and genetic makeup of this strain could provide insights into its ecological functions and potential applications in agriculture or biotechnology. As a member of a genus that is frequently involved in the decomposition of organic matter and the biocontrol of plant pathogens, Microbacterium sp. Leaf203 may play a significant role in promoting plant health and soil fertility. Further research on this strain could elucidate its specific interactions within its ecosystem and its potential benefits in sustainable agricultural practices.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusMicrobacterium
SpeciesMicrobacterium sp. Leaf203
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbacterium sp. Leaf203 contig_9, whole genome shotgun

Gene Summary

Adenine Count

519672 bp

Thymine Count

515148 bp

Guanine Count

1200576 bp

Cytosine Count

1204398 bp

Genome Length

3448852 bp

Protein-coding Genes

3067 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
kojibiose phosphorylaseASE56_15215Q8L164Negative2454025 - 245656293930.4
haloacid dehalogenaseASE56_15220Q49741Negative2456685 - 245741925958.5
acetate kinaseASE56_15225A5CPD5Negative2457546 - 245877843231.5
phosphate acetyltransferaseASE56_15230P9WHP0Negative2458775 - 246091975535.4
deor family transcriptional regulatorASE56_15235Not AvailableNegative2460978 - 246173926170.4
gdp-mannose pyrophosphataseASE56_15240A1JL31Positive2461778 - 246244925184.4
spermidine/putrescine abc transporter atp-binding proteinASE56_15245Q7NWX3Negative2462651 - 246373038506.5
abc transporter permeaseASE56_15250Not AvailableNegative2463727 - 246453928504.9
abc transporter permeaseASE56_15255Not AvailableNegative2464536 - 246545031969.5
abc transporter substrate-binding proteinASE56_15260Not AvailableNegative2465458 - 246663040398.1

Displaying genes 2211 – 2220 of 3130 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

229 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000542HgHgChemical structure of HgNot available
Average200.59Da
Monoisotopic201.9706256Da

Displaying 1–10 of 229 metabolites

Health Effects

No health effects information available for this bacterium.