Bosea sp. Root483D1

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Alloboseaceae

Genus

Allobosea

Description

Bosea sp. Root483D1 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species has been documented with a single replicon, indicating a streamlined genetic organization which may contribute to its adaptability and efficiency in various environments. The genetic information for Bosea sp. Root483D1 is accessible under the accession number LMJW00000000.1, providing a reference for further studies and exploration of its biological characteristics. The classification as Gram-negative suggests that Bosea sp. Root483D1 possesses a thin peptidoglycan layer surrounded by an outer membrane, which can influence its interactions with the environment, including susceptibility to antibiotics and the ability to form biofilms. Understanding these traits can offer insights into the ecological roles of this bacterium, particularly in soil or root-associated environments where it may contribute to nutrient cycling or plant interactions. The presence of a single replicon may also imply a potentially streamlined metabolism, which can be advantageous in competitive microbial communities. This trait could facilitate the bacterium's survival and proliferation in specific niches, reflecting its ecological adaptability. Overall, the known traits of Bosea sp. Root483D1 suggest its significance within microbial ecosystems, particularly in relation to its interactions with plants and its role in soil health. Further research could elucidate the functional implications of its genetic makeup and ecological contributions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyAlloboseaceae
GenusAllobosea
SpeciesAllobosea sp. Root483D1
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bosea sp. Root483D1 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1103369 bp

Thymine Count

1115777 bp

Guanine Count

2199921 bp

Cytosine Count

2188439 bp

Genome Length

6609529 bp

Protein-coding Genes

6035 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinASE66_05370Not AvailablePositive1168376 - 116929930992.9
hypothetical proteinASE66_05375O69279Positive1169335 - 116965210731.9
kpsf/gutq family proteinASE66_05385O67500Negative1170586 - 117155733490.7
hypothetical proteinASE66_05390Not AvailablePositive1171707 - 117326356478.3
chloramphenicol acetyltransferaseASE66_05395P26838Negative1173438 - 117405822606.7
hypothetical proteinASE66_05400A6SU94Negative1174081 - 117478225434.4
phosphonate metabolism protein phnmASE66_05405P16689Negative1174790 - 117592941035.9
hypothetical proteinASE66_05410P16679Negative1175929 - 117662725178.4
phosphonate c-p lyase system protein phnkASE66_05415P16678Negative1176674 - 117747429375.5
carbon-phosphorus lyaseASE66_05420Q52987Negative1177477 - 117837933641.0

Displaying genes 1081 – 1090 of 6097 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

376 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 376 metabolites

Health Effects

No health effects information available for this bacterium.