Lysobacter sp. Root96

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Lysobacter

Description

Lysobacter sp. Root96 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This taxonomic classification places it within the Lysobacter genus, which is known for its ecological roles and potential applications in biocontrol and bioremediation. The organism is cataloged under the accession number LMJN00000000.1, which is part of the database entries that facilitate further research and comparative studies within microbial ecology and systematics. As a member of the Lysobacter genus, Lysobacter sp. Root96 may exhibit traits such as the production of antimicrobial compounds, which can be beneficial in suppressing plant pathogens and promoting plant health. The ecological significance of Lysobacter sp. Root96 may extend to its interactions within soil microbiomes, where it could contribute to nutrient cycling and the overall health of the ecosystem. The traits of being Gram-negative and rod-shaped suggest adaptability to various environments, potentially allowing it to thrive in diverse soil conditions. In summary, Lysobacter sp. Root96 is a Gram-negative, rod-shaped bacterium with a single replicon, which may play a valuable role in its native ecological niches, especially concerning plant health and soil dynamics. Its potential for biocontrol applications highlights the importance of studying such microorganisms in the context of sustainable agriculture and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusLysobacter
SpeciesLysobacter sp. Root96
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Lysobacter sp. Root96
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lysobacter sp. Root96 contig_8, whole genome shotgun sequence.

Gene Summary

Adenine Count

695867 bp

Thymine Count

697887 bp

Guanine Count

1511679 bp

Cytosine Count

1509194 bp

Genome Length

4415595 bp

Protein-coding Genes

3776 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosomal protein l11 methyltransferaseASE45_14990Not AvailablePositive3319316 - 332023632932.7
hypothetical proteinASE45_14995Not AvailablePositive3320283 - 332120332485.3
fis family transcriptional regulatorASE45_15000Not AvailablePositive3321324 - 332159610106.0
phosphatidate cytidylyltransferaseASE45_15005Not AvailableNegative3322422 - 332338135539.6
acyl-phosphate glycerol 3-phosphate acyltransferaseASE45_15010Not AvailableNegative3323378 - 332410326267.4
hypothetical proteinASE45_15015Not AvailableNegative3324088 - 332465120193.6
serine/threonine protein phosphataseASE45_15020Not AvailableNegative3324648 - 332599149229.1
hypothetical proteinASE45_15025Not AvailableNegative3325988 - 332773064471.7
cdp-alcohol phosphatidyltransferaseASE45_15030Not AvailableNegative3327727 - 332837122119.3
phosphoribosylaminoimidazolecarboxamide formyltransferaseASE45_15035Not AvailablePositive3328647 - 333023656356.1

Displaying genes 2951 – 2960 of 3887 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.