Lysobacter sp. Root96

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Lysobacter

Description

Lysobacter sp. Root96 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This taxonomic classification places it within the Lysobacter genus, which is known for its ecological roles and potential applications in biocontrol and bioremediation. The organism is cataloged under the accession number LMJN00000000.1, which is part of the database entries that facilitate further research and comparative studies within microbial ecology and systematics. As a member of the Lysobacter genus, Lysobacter sp. Root96 may exhibit traits such as the production of antimicrobial compounds, which can be beneficial in suppressing plant pathogens and promoting plant health. The ecological significance of Lysobacter sp. Root96 may extend to its interactions within soil microbiomes, where it could contribute to nutrient cycling and the overall health of the ecosystem. The traits of being Gram-negative and rod-shaped suggest adaptability to various environments, potentially allowing it to thrive in diverse soil conditions. In summary, Lysobacter sp. Root96 is a Gram-negative, rod-shaped bacterium with a single replicon, which may play a valuable role in its native ecological niches, especially concerning plant health and soil dynamics. Its potential for biocontrol applications highlights the importance of studying such microorganisms in the context of sustainable agriculture and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusLysobacter
SpeciesLysobacter sp. Root96
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Lysobacter sp. Root96
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lysobacter sp. Root96 contig_8, whole genome shotgun sequence.

Gene Summary

Adenine Count

695867 bp

Thymine Count

697887 bp

Guanine Count

1511679 bp

Cytosine Count

1509194 bp

Genome Length

4415595 bp

Protein-coding Genes

3776 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
biopolymer transporterASE45_07860Not AvailablePositive1732331 - 173278016389.7
lipid a export permease/atp-binding protein msbaASE45_07865Not AvailablePositive1732819 - 173452562027.0
tetraacyldisaccharide 4'-kinaseASE45_07870Not AvailablePositive1734528 - 173558037522.1
3-deoxy-manno-octulosonate cytidylyltransferaseASE45_07875Not AvailablePositive1735729 - 173649627419.8
phosphotyrosine protein phosphataseASE45_07880Not AvailablePositive1736500 - 173698217425.7
excinuclease abc subunit cASE45_07885Not AvailablePositive1737278 - 173917068633.3
cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferaseASE45_07890Not AvailablePositive1739167 - 173974221242.8
Trna-glyNot AvailableNot AvailablePositive1739871 - 1739946Not Available
Trna-cysNot AvailableNot AvailablePositive1740066 - 1740139Not Available
Trna-leuNot AvailableNot AvailablePositive1740388 - 1740474Not Available

Displaying genes 1571 – 1580 of 3887 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.