Lysobacter sp. Root96

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Lysobacter

Description

Lysobacter sp. Root96 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This taxonomic classification places it within the Lysobacter genus, which is known for its ecological roles and potential applications in biocontrol and bioremediation. The organism is cataloged under the accession number LMJN00000000.1, which is part of the database entries that facilitate further research and comparative studies within microbial ecology and systematics. As a member of the Lysobacter genus, Lysobacter sp. Root96 may exhibit traits such as the production of antimicrobial compounds, which can be beneficial in suppressing plant pathogens and promoting plant health. The ecological significance of Lysobacter sp. Root96 may extend to its interactions within soil microbiomes, where it could contribute to nutrient cycling and the overall health of the ecosystem. The traits of being Gram-negative and rod-shaped suggest adaptability to various environments, potentially allowing it to thrive in diverse soil conditions. In summary, Lysobacter sp. Root96 is a Gram-negative, rod-shaped bacterium with a single replicon, which may play a valuable role in its native ecological niches, especially concerning plant health and soil dynamics. Its potential for biocontrol applications highlights the importance of studying such microorganisms in the context of sustainable agriculture and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusLysobacter
SpeciesLysobacter sp. Root96
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Lysobacter sp. Root96
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lysobacter sp. Root96 contig_8, whole genome shotgun sequence.

Gene Summary

Adenine Count

695867 bp

Thymine Count

697887 bp

Guanine Count

1511679 bp

Cytosine Count

1509194 bp

Genome Length

4415595 bp

Protein-coding Genes

3776 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phenylphosphate carboxylase subunit deltaASE45_04830Not AvailableNegative1086385 - 108693319672.6
d-arabinose 5-phosphate isomeraseASE45_04835Not AvailableNegative1087010 - 108802635199.7
bola family transcriptional regulatorASE45_04840Not AvailablePositive1088353 - 10885898252.87
udp-n-acetylglucosamine 1-carboxyvinyltransferaseASE45_04845Not AvailablePositive1088606 - 108986243930.1
hypothetical proteinASE45_04850Not AvailableNegative1090050 - 109074824866.0
hypothetical proteinASE45_04855Not AvailableNegative1090748 - 109142824941.9
phosphoribosylglycinamide formyltransferaseASE45_04860Not AvailableNegative1091572 - 109223423171.8
hypothetical proteinASE45_04865Not AvailableNegative1092455 - 109286214947.3
hypothetical proteinASE45_04870Not AvailableNegative1092964 - 109345817002.9
hypothetical proteinASE45_04875Not AvailableNegative1093434 - 109403923023.9

Displaying genes 1051 – 1060 of 3887 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.