Acidovorax sp. Root275

Gram-negativeBacilli

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Acidovorax

Description

Acidovorax sp. Root275 is a Gram-negative bacterium characterized by its bacilli shape and the presence of flagella, which likely aids in its motility. This species has been documented with a single replicon, indicating a relatively simple genomic structure compared to other bacteria that may possess multiple replicons. The accession number for Acidovorax sp. Root275 is LMJH00000000.1, which is essential for referencing its genomic data in scientific databases. The presence of flagella in Acidovorax sp. Root275 may facilitate its movement in various environments, potentially allowing it to colonize different substrates or interact with plant roots. This characteristic can be significant in ecological contexts, particularly in soil ecosystems where bacterial motility can influence nutrient cycling and plant health. Overall, the traits of Acidovorax sp. Root275, particularly its Gram-negative status and motility, suggest it may play a role in soil microbiomes, possibly contributing to the degradation of organic materials or influencing plant-microbe interactions. Further research into this species could elucidate its specific ecological functions and applications in agriculture or bioremediation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusAcidovorax
SpeciesAcidovorax sp. Root275
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Acidovorax sp. Root275
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acidovorax sp. Root275 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

973066 bp

Thymine Count

982428 bp

Guanine Count

1811361 bp

Cytosine Count

1792979 bp

Genome Length

5561820 bp

Protein-coding Genes

4881 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
urea abc transporter atp-binding subunit urteASE52_19955Not AvailableNegative4508562 - 450925425063.8
urea abc transporter atp-binding protein urtdASE52_19960Not AvailableNegative4509423 - 451029831775.5
urea abc transporter permease subunit urtcASE52_19965Not AvailableNegative4510295 - 451142241012.4
urea abc transporter permeaseASE52_19970Not AvailableNegative4511430 - 451301055710.5
branched-chain amino acid abc transporter substrate-binding proteinASE52_19975Not AvailableNegative4513175 - 451444646272.6
acylaldehyde oxidaseASE52_19980Not AvailablePositive4514841 - 451711179373.6
isoquinoline 1-oxidoreductaseASE52_19985Not AvailablePositive4517120 - 451759616252.7
udp-n-acetylglucosamine 1-carboxyvinyltransferaseASE52_19990Not AvailablePositive4517796 - 451909747303.8
hypothetical proteinASE52_19995Not AvailableNegative4519245 - 451973618077.6
diguanylate cyclaseASE52_20000Not AvailableNegative4520090 - 452114838349.6

Displaying genes 3971 – 3980 of 4932 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.