Acidovorax sp. Root275

Gram-negativeBacilli

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Acidovorax

Description

Acidovorax sp. Root275 is a Gram-negative bacterium characterized by its bacilli shape and the presence of flagella, which likely aids in its motility. This species has been documented with a single replicon, indicating a relatively simple genomic structure compared to other bacteria that may possess multiple replicons. The accession number for Acidovorax sp. Root275 is LMJH00000000.1, which is essential for referencing its genomic data in scientific databases. The presence of flagella in Acidovorax sp. Root275 may facilitate its movement in various environments, potentially allowing it to colonize different substrates or interact with plant roots. This characteristic can be significant in ecological contexts, particularly in soil ecosystems where bacterial motility can influence nutrient cycling and plant health. Overall, the traits of Acidovorax sp. Root275, particularly its Gram-negative status and motility, suggest it may play a role in soil microbiomes, possibly contributing to the degradation of organic materials or influencing plant-microbe interactions. Further research into this species could elucidate its specific ecological functions and applications in agriculture or bioremediation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusAcidovorax
SpeciesAcidovorax sp. Root275
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Acidovorax sp. Root275
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acidovorax sp. Root275 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

973066 bp

Thymine Count

982428 bp

Guanine Count

1811361 bp

Cytosine Count

1792979 bp

Genome Length

5561820 bp

Protein-coding Genes

4881 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-oxoprolinaseASE52_07540Not AvailableNegative1696057 - 1699719130809.0
transcriptional regulatorASE52_07545Not AvailableNegative1699801 - 170033119225.1
c4-dicarboxylate abc transporter substrate-binding proteinASE52_07550Not AvailablePositive1700512 - 170152536451.1
c4-dicarboxylate abc transporter permeaseASE52_07555Not AvailablePositive1701528 - 170206419707.4
c4-dicarboxylate abc transporter permeaseASE52_07560Not AvailablePositive1702283 - 170358146525.5
protein crcbASE52_07565Not AvailablePositive1703615 - 170400113254.6
3-isopropylmalate dehydrogenaseASE52_07570Not AvailablePositive1704093 - 170495632361.5
mfs transporterASE52_07575Not AvailableNegative1705059 - 170625541051.2
recombinase rmucASE52_07580Not AvailableNegative1706252 - 170809366790.0
d-glycerate dehydrogenaseASE52_07585Not AvailableNegative1708172 - 170916735523.7

Displaying genes 1501 – 1510 of 4932 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.