Achromobacter sp. Root83

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Alcaligenaceae

Genus

Achromobacter

Description

Achromobacter sp. Root83 is a notable bacterium characterized by the presence of flagella, which suggests a potential for motility. This feature may enable the bacterium to navigate its environment effectively, possibly aiding in colonization or interaction with plant roots or other substrates. The genetic makeup of Achromobacter sp. Root83 includes a single replicon, indicating a streamlined genome organization that could provide insights into its adaptability and efficiency in resource utilization. The accessions for this organism are cataloged under LMIU00000000.1, which allows for further exploration and study of its genetic and functional attributes. In ecological contexts, the motility conferred by flagella may play a crucial role in the bacterium's interactions within its habitat, particularly in soil or rhizosphere environments. Such motility can facilitate nutrient acquisition and potentially influence microbial community dynamics. Understanding the characteristics of Achromobacter sp. Root83 can provide insights into its ecological functions, especially in relation to plant interactions and soil health. Overall, the combination of motility and genomic simplicity may position Achromobacter sp. Root83 as an important player in its ecosystem, warranting further investigation into its ecological roles and applications in microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyAlcaligenaceae
GenusAchromobacter
SpeciesAchromobacter sp. Root83
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Achromobacter sp. Root83 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1058083 bp

Thymine Count

1063315 bp

Guanine Count

2050448 bp

Cytosine Count

2040702 bp

Genome Length

6212786 bp

Protein-coding Genes

5474 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysr family transcriptional regulatorASE30_04905P71318Positive1083666 - 108458033421.6
reactive intermediate/imine deaminaseASE30_04910P40431Positive1084689 - 108507513275.0
atp-dependent dna helicase recgASE30_04915Q8XD86Positive1085115 - 108720576174.8
lysr family transcriptional regulatorASE30_04920P0ACQ6Positive1087286 - 108823634582.3
dna starvation/stationary phase protection proteinASE30_04925P73321Positive1088394 - 108889418603.2
capsular biosynthesis proteinASE30_04930Not AvailableNegative1088979 - 109114779098.9
hypothetical proteinASE30_04935Not AvailableNegative1091380 - 109346175910.7
glycosyl transferaseASE30_04940Not AvailableNegative1093475 - 109390915812.0
polyhydroxyalkanoate biosynthesis repressor pharASE30_04945Not AvailablePositive1095127 - 109590029262.5
sugar abc transporter atp-binding proteinASE30_04950P57013Positive1095924 - 109661024766.1

Displaying genes 991 – 1000 of 5576 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

373 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000288aminohydroquinoneC6H7NO2Chemical structure of aminohydroquinoneNot available
Average125.127Da
Monoisotopic125.0476785Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 373 metabolites

Health Effects

No health effects information available for this bacterium.