Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Rhodanobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Rhodanobacter |
| Species | Rhodanobacter sp. Root179 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
655793 bp
Thymine Count
651430 bp
Guanine Count
1299271 bp
Cytosine Count
1299256 bp
Genome Length
3905750 bp
Protein-coding Genes
3353 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine--trna ligase | ASD82_04035 | Q3BNC2 | Negative | 890351 - 891562 | 44792.1 |
| peptidase m23 | ASD82_04040 | P44693 | Positive | 891744 - 893189 | 53570.9 |
| anhydro-n-acetylmuramic acid kinase | ASD82_04045 | Q4UPQ7 | Positive | 893202 - 894335 | 39482.1 |
| hypothetical protein | ASD82_04050 | Not Available | Negative | 894305 - 894616 | 11508.5 |
| mfs transporter | ASD82_04055 | Q1RI01 | Negative | 894765 - 896003 | 44787.1 |
| dna-(apurinic or apyrimidinic site) lyase | ASD82_04060 | O26314 | Negative | 896071 - 896841 | 29796.7 |
| orotate phosphoribosyltransferase | ASD82_04065 | Q02E31 | Positive | 896994 - 897641 | 23266.9 |
| abc transporter atpase | ASD82_04070 | Not Available | Positive | 897768 - 898412 | 23961.2 |
| phosphoglucomutase | ASD82_04075 | Q02E40 | Negative | 898461 - 900803 | 83295.9 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | ASD82_04080 | A1S2D0 | Negative | 900864 - 901322 | 15873.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
