Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Rhodanobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Rhodanobacter |
| Species | Rhodanobacter sp. Root179 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
655793 bp
Thymine Count
651430 bp
Guanine Count
1299271 bp
Cytosine Count
1299256 bp
Genome Length
3905750 bp
Protein-coding Genes
3353 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | ASD82_09190 | B2I9G0 | Negative | 2142357 - 2143445 | 38624.8 |
| shikimate kinase | ASD82_09195 | Q60BY3 | Negative | 2143442 - 2143996 | 20495.4 |
| nad(p)-dependent oxidoreductase | ASD82_09200 | Not Available | Positive | 2144133 - 2144966 | 29948.7 |
| hypothetical protein | ASD82_09205 | Q01XQ7 | Positive | 2144984 - 2145328 | 12069.6 |
| hypothetical protein | ASD82_09210 | Not Available | Positive | 2145440 - 2145643 | 7226.68 |
| kinase | ASD82_09215 | Not Available | Negative | 2145714 - 2146544 | 31520.0 |
| pyridoxine/pyridoxamine 5'-phosphate oxidase | ASD82_09220 | Q2P6C7 | Positive | 2146777 - 2147364 | 22678.6 |
| secondary thiamine-phosphate synthase | ASD82_09225 | P74125 | Positive | 2147361 - 2147801 | 15848.0 |
| abc transporter substrate-binding protein | ASD82_09230 | Not Available | Positive | 2147806 - 2148615 | 30088.5 |
| Trna-gly | Not Available | Not Available | Positive | 2148803 - 2148873 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
