Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Rhodanobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Rhodanobacter |
| Species | Rhodanobacter sp. Root627 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
644781 bp
Thymine Count
634842 bp
Guanine Count
1203421 bp
Cytosine Count
1227713 bp
Genome Length
3710843 bp
Protein-coding Genes
3193 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASD68_00160 | Not Available | Negative | 28176 - 28436 | 9912.79 |
| 3-dehydroquinate synthase | ASD68_00165 | Q4UX86 | Negative | 28510 - 29610 | 39546.7 |
| shikimate kinase | ASD68_00170 | B2FQI7 | Negative | 29607 - 30161 | 20142.0 |
| nad(p)-dependent oxidoreductase | ASD68_00175 | P0AD13 | Positive | 30189 - 31022 | 29931.0 |
| hypothetical protein | ASD68_00180 | Q01XQ7 | Positive | 31042 - 31386 | 12020.4 |
| hypothetical protein | ASD68_00185 | Not Available | Positive | 31497 - 31700 | 7327.79 |
| kinase | ASD68_00190 | Not Available | Negative | 31759 - 32589 | 31437.6 |
| pyridoxine/pyridoxamine 5'-phosphate oxidase | ASD68_00195 | Q4UX84 | Positive | 32747 - 33334 | 22635.6 |
| secondary thiamine-phosphate synthase | ASD68_00200 | P74125 | Positive | 33331 - 33774 | 15841.9 |
| abc transporter substrate-binding protein | ASD68_00205 | Not Available | Positive | 33819 - 34616 | 29197.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
