Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Rhodanobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Rhodanobacter |
| Species | Rhodanobacter sp. Root627 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
644781 bp
Thymine Count
634842 bp
Guanine Count
1203421 bp
Cytosine Count
1227713 bp
Genome Length
3710843 bp
Protein-coding Genes
3193 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspf | ASD68_10745 | P31744 | Negative | 2354329 - 2355546 | 43862.2 |
| type ii secretion system protein gspe | ASD68_10750 | P31742 | Negative | 2355826 - 2357547 | 62730.5 |
| protease | ASD68_10755 | P23314 | Negative | 2357744 - 2359693 | 66369.7 |
| hydrolase tatd | ASD68_10760 | E3G381 | Positive | 2360357 - 2361151 | 29526.1 |
| 23s rrna pseudouridylate synthase | ASD68_10765 | Q8ZFQ3 | Negative | 2361268 - 2361804 | 19879.1 |
| methyltransferase | ASD68_10770 | Not Available | Negative | 2361818 - 2362594 | 27731.5 |
| ligand-gated channel | ASD68_10775 | P76115 | Positive | 2363152 - 2365170 | 72704.6 |
| hypothetical protein | ASD68_10780 | Not Available | Positive | 2365285 - 2365755 | 17322.6 |
| hypothetical protein | ASD68_10785 | Not Available | Positive | 2365763 - 2368468 | 98832.1 |
| s-(hydroxymethyl)glutathione dehydrogenase | ASD68_10790 | P73138 | Negative | 2368488 - 2369600 | 39237.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
