Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Rhodanobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Rhodanobacter |
| Species | Rhodanobacter sp. Root627 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
644781 bp
Thymine Count
634842 bp
Guanine Count
1203421 bp
Cytosine Count
1227713 bp
Genome Length
3710843 bp
Protein-coding Genes
3193 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit alpha | ASD68_00515 | Q87EY0 | Negative | 99456 - 102995 | 130590.0 |
| ribonuclease hii | ASD68_00520 | Q02RB4 | Negative | 103102 - 103695 | 21040.8 |
| lipid-a-disaccharide synthase | ASD68_00525 | Q4USP7 | Negative | 103748 - 104956 | 43862.6 |
| udp-n-acetylglucosamine o-acyltransferase | ASD68_00530 | B4SQ11 | Negative | 105017 - 105805 | 28111.4 |
| 3-hydroxyacyl-acp dehydratase | ASD68_00535 | Q2P4B6 | Negative | 105802 - 106275 | 17369.6 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | ASD68_00540 | Q8PML5 | Negative | 106268 - 107320 | 36144.4 |
| outer membrane protein assembly factor bama | ASD68_00545 | A8GID8 | Negative | 107400 - 109823 | 90169.4 |
| rip metalloprotease rsep | ASD68_00550 | Q9PEI1 | Negative | 110010 - 111356 | 47820.8 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | ASD68_00555 | Q4USQ4 | Negative | 111396 - 112571 | 40492.0 |
| phosphatidate cytidylyltransferase | ASD68_00560 | P0ABG2 | Negative | 112590 - 113405 | 28811.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
