Massilia sp. Root1485

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Massilia

Description

Massilia sp. Root1485 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species has a single replicon, indicating a streamlined genetic structure that can be advantageous for specific ecological niches. The accession number associated with this strain is LMGB00000000.1, which serves as a reference for genomic and taxonomic studies. The Gram-negative classification of Massilia sp. Root1485 suggests a complex cell wall structure, which typically includes an outer membrane containing lipopolysaccharides. This structural feature may play a crucial role in its survival and interactions within its environment, particularly in nutrient acquisition and resistance to certain antimicrobial agents. In terms of ecological insights, the presence of Massilia sp. in its natural habitat may indicate its involvement in various ecological processes, including nutrient cycling and interactions with plant roots or other microorganisms. Understanding the traits of Massilia sp. Root1485 can provide a foundation for further research into its ecological roles and potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusMassilia
SpeciesMassilia sp. Root1485
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Massilia sp. Root1485
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Massilia sp. Root1485 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1229097 bp

Thymine Count

1224032 bp

Guanine Count

2395323 bp

Cytosine Count

2393213 bp

Genome Length

7251154 bp

Protein-coding Genes

6026 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sensor protein lytsASD92_06535Not AvailableNegative6435184 - 643623940038.8
hypothetical proteinASD92_06540Not AvailablePositive6436348 - 643665911296.3
deaminaseASD92_06545Not AvailableNegative6436713 - 643736022968.3
hypothetical proteinASD92_06550Not AvailableNegative6437380 - 643834834906.1
trypsinASD92_06555Not AvailableNegative6438345 - 643964046361.5
gtp cyclohydrolaseASD92_06560Not AvailableNegative6439808 - 644045523628.3
pas domain-containing sensor histidine kinaseASD92_06565Not AvailablePositive6440671 - 644295683034.8
hypothetical proteinASD92_06570Not AvailableNegative6442929 - 644509779291.2
xylan 1,4-beta-xylosidaseASD92_06575Not AvailableNegative6445178 - 644680959611.4
hypothetical proteinASD92_06580Not AvailableNegative6446912 - 644853758325.7

Displaying genes 5441 – 5450 of 6111 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.