Massilia sp. Root1485

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Massilia

Description

Massilia sp. Root1485 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species has a single replicon, indicating a streamlined genetic structure that can be advantageous for specific ecological niches. The accession number associated with this strain is LMGB00000000.1, which serves as a reference for genomic and taxonomic studies. The Gram-negative classification of Massilia sp. Root1485 suggests a complex cell wall structure, which typically includes an outer membrane containing lipopolysaccharides. This structural feature may play a crucial role in its survival and interactions within its environment, particularly in nutrient acquisition and resistance to certain antimicrobial agents. In terms of ecological insights, the presence of Massilia sp. in its natural habitat may indicate its involvement in various ecological processes, including nutrient cycling and interactions with plant roots or other microorganisms. Understanding the traits of Massilia sp. Root1485 can provide a foundation for further research into its ecological roles and potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusMassilia
SpeciesMassilia sp. Root1485
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Massilia sp. Root1485
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Massilia sp. Root1485 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1229097 bp

Thymine Count

1224032 bp

Guanine Count

2395323 bp

Cytosine Count

2393213 bp

Genome Length

7251154 bp

Protein-coding Genes

6026 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
adenylosuccinate synthetaseASD92_05625Not AvailableNegative6249248 - 625055846470.9
atp phosphoribosyltransferase regulatory subunitASD92_05630Not AvailableNegative6250561 - 625171541925.5
protease modulator hflcASD92_05635Not AvailableNegative6251878 - 625275632375.6
hflk proteinASD92_05640Not AvailableNegative6252756 - 625406647826.2
gtpase hflxASD92_05645Not AvailableNegative6254148 - 625533543216.8
rna chaperone hfqASD92_05650Not AvailableNegative6255341 - 62555778817.72
ribosome-associated gtpase engaASD92_05655Not AvailableNegative6255791 - 625712849199.3
outer membrane protein assembly factor bambASD92_05660Not AvailableNegative6257135 - 625828040368.5
hypothetical proteinASD92_05665Not AvailableNegative6258426 - 625907923479.6
histidine--trna ligaseASD92_05670Not AvailableNegative6259111 - 626045749724.1

Displaying genes 5261 – 5270 of 6111 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.