Massilia sp. Root1485

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Massilia

Description

Massilia sp. Root1485 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species has a single replicon, indicating a streamlined genetic structure that can be advantageous for specific ecological niches. The accession number associated with this strain is LMGB00000000.1, which serves as a reference for genomic and taxonomic studies. The Gram-negative classification of Massilia sp. Root1485 suggests a complex cell wall structure, which typically includes an outer membrane containing lipopolysaccharides. This structural feature may play a crucial role in its survival and interactions within its environment, particularly in nutrient acquisition and resistance to certain antimicrobial agents. In terms of ecological insights, the presence of Massilia sp. in its natural habitat may indicate its involvement in various ecological processes, including nutrient cycling and interactions with plant roots or other microorganisms. Understanding the traits of Massilia sp. Root1485 can provide a foundation for further research into its ecological roles and potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusMassilia
SpeciesMassilia sp. Root1485
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Massilia sp. Root1485
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Massilia sp. Root1485 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1229097 bp

Thymine Count

1224032 bp

Guanine Count

2395323 bp

Cytosine Count

2393213 bp

Genome Length

7251154 bp

Protein-coding Genes

6026 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-phosphoshikimate 1-carboxyvinyltransferaseASD92_29985Not AvailableNegative5238088 - 523941947380.6
prephenate dehydrogenaseASD92_29990Not AvailableNegative5239416 - 524032131446.6
aspartate aminotransferaseASD92_29995Not AvailableNegative5240324 - 524142739551.1
chorismate mutaseASD92_30000Not AvailableNegative5241457 - 524252738440.0
3-phosphoserine/phosphohydroxythreonine aminotransferaseASD92_30005Not AvailableNegative5242683 - 524377139667.6
hypothetical proteinASD92_30010Not AvailableNegative5243782 - 524426117413.5
dna gyrase subunit aASD92_30015Not AvailableNegative5244613 - 524722897417.0
hypothetical proteinASD92_30020Not AvailablePositive5247624 - 524833724945.6
3-demethylubiquinone-9 3-methyltransferaseASD92_30025Not AvailablePositive5248446 - 524915325834.3
phosphoglycolate phosphataseASD92_30030Not AvailablePositive5249164 - 524986224778.4

Displaying genes 4371 – 4380 of 6111 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.