Massilia sp. Root1485

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Massilia

Description

Massilia sp. Root1485 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species has a single replicon, indicating a streamlined genetic structure that can be advantageous for specific ecological niches. The accession number associated with this strain is LMGB00000000.1, which serves as a reference for genomic and taxonomic studies. The Gram-negative classification of Massilia sp. Root1485 suggests a complex cell wall structure, which typically includes an outer membrane containing lipopolysaccharides. This structural feature may play a crucial role in its survival and interactions within its environment, particularly in nutrient acquisition and resistance to certain antimicrobial agents. In terms of ecological insights, the presence of Massilia sp. in its natural habitat may indicate its involvement in various ecological processes, including nutrient cycling and interactions with plant roots or other microorganisms. Understanding the traits of Massilia sp. Root1485 can provide a foundation for further research into its ecological roles and potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusMassilia
SpeciesMassilia sp. Root1485
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Massilia sp. Root1485
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Massilia sp. Root1485 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1229097 bp

Thymine Count

1224032 bp

Guanine Count

2395323 bp

Cytosine Count

2393213 bp

Genome Length

7251154 bp

Protein-coding Genes

6026 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinASD92_01065Not AvailableNegative3307351 - 330802224145.1
delta-aminolevulinic acid dehydrataseASD92_01070Not AvailableNegative3308164 - 330917737146.0
gtp-binding proteinASD92_01075Not AvailableNegative3309206 - 330989825827.0
cytochrome cASD92_01080Not AvailablePositive3310074 - 331075723557.0
cytochrome c biogenesis protein resbASD92_01085Not AvailablePositive3310903 - 331299677345.0
cytochrome c biogenesis proteinASD92_01090Not AvailablePositive3313027 - 331419343320.4
sulfoxide reductase catalytic subunit yedyASD92_01095Not AvailablePositive3314449 - 331542636932.2
sulfite oxidaseASD92_01100Not AvailablePositive3315439 - 331608024552.8
hypothetical proteinASD92_01105Not AvailablePositive3316085 - 33162676756.41
diaminopimelate decarboxylaseASD92_01110Not AvailableNegative3316314 - 331759145701.9

Displaying genes 2791 – 2800 of 6111 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.