Caulobacter sp. Root1472

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Caulobacterales

Family

Caulobacteraceae

Genus

Caulobacter

Description

Caulobacter sp. Root1472 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which contribute to its motility. This organism is notable for possessing a single replicon, indicating that it has a streamlined genomic structure which can be advantageous for its adaptability and growth in various environments. The accession number for Caulobacter sp. Root1472 is LMFX00000000.1, which provides a reference for its genomic data. The presence of flagella suggests that this bacterium is capable of movement, allowing it to navigate through its environment effectively. This motility may play a significant role in its ecological interactions, such as colonization of surfaces or competition with other microorganisms. In terms of ecological insights, Caulobacter species are often found in aquatic environments and are known for their role in nutrient cycling and biofilm formation. The characteristics of Caulobacter sp. Root1472 may enable it to thrive in such habitats, where it can contribute to the microbial community structure and function. The organism's single replicon and motility could allow it to efficiently respond to environmental changes, optimizing its survival and ecological success. Overall, Caulobacter sp. Root1472 exemplifies the adaptive traits that can influence microbial dynamics in its ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderCaulobacterales
FamilyCaulobacteraceae
GenusCaulobacter
SpeciesCaulobacter sp. Root1472
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Caulobacter sp. Root1472
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Caulobacter sp. Root1472 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

899488 bp

Thymine Count

898642 bp

Guanine Count

1953759 bp

Cytosine Count

1957559 bp

Genome Length

5709804 bp

Protein-coding Genes

5047 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arsr family transcriptional regulatorASD47_25500P37424Positive4627514 - 462798417423.3
hypothetical proteinASD47_25505Not AvailableNegative4628254 - 462878419802.4
adenosine deaminaseASD47_25510Q9A3M3Positive4628883 - 462990236968.1
aminotransferase degtASD47_25515Not AvailableNegative4630086 - 463106634096.4
4-coumarate--coa ligaseASD47_25520Not AvailableNegative4631198 - 463275454849.7
3-hydroxyacyl-coa dehydrogenaseASD47_25525Q6NYL3Negative4632826 - 463490474719.6
serine hydrolaseASD47_25530P9WLZ2Negative4635032 - 463625845001.3
histidine kinaseASD47_25535Not AvailablePositive4636367 - 463831969936.5
tetr family transcriptional regulatorASD47_25540Not AvailablePositive4638486 - 463972745533.4
marr family transcriptional regulatorASD47_25545Not AvailablePositive4640174 - 464068618389.3

Displaying genes 4121 – 4130 of 5100 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

359 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da

Displaying 1–10 of 359 metabolites

Health Effects

No health effects information available for this bacterium.