Caulobacter sp. Root1455

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Caulobacterales

Family

Caulobacteraceae

Genus

Caulobacter

Description

Caulobacter sp. Root1455 is a Gram-negative bacterium characterized by its rod-shaped morphology. It possesses flagella, which are essential for motility and may play a role in its ecological interactions. This species has a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. The accession number for Caulobacter sp. Root1455 is LMFQ00000000.1, which can be used to locate additional genomic information about this organism. The presence of flagella suggests that Caulobacter sp. Root1455 is capable of movement, which is significant for its lifestyle, particularly in aquatic or sediment environments where it may search for nutrients or engage in interactions with other microorganisms. The combination of these features indicates that Caulobacter sp. Root1455 has adaptations that enable it to thrive in diverse ecological niches. Its motility may enhance its ability to colonize surfaces and access organic materials, thereby playing a role in nutrient cycling in its habitat. This ecological insight underscores the importance of understanding the traits of microorganisms like Caulobacter sp. Root1455 in the context of their roles in environmental processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderCaulobacterales
FamilyCaulobacteraceae
GenusCaulobacter
SpeciesCaulobacter sp. Root1455
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Caulobacter sp. Root1455
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Caulobacter sp. Root1455 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

798152 bp

Thymine Count

795626 bp

Guanine Count

1735609 bp

Cytosine Count

1753774 bp

Genome Length

5083237 bp

Protein-coding Genes

4523 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp pyrophosphate synthaseASD21_16740Q9A707Positive4855418 - 485619728085.4
phosphatidate cytidylyltransferaseASD21_16745Q2YRP9Positive4856175 - 485702329955.2
1-deoxy-d-xylulose 5-phosphate reductoisomeraseASD21_16750Q9A709Positive4857041 - 485824941708.3
rip metalloprotease rsepASD21_16755Q9A710Positive4858279 - 485947543160.8
outer membrane protein assembly factor bamaASD21_16760C6V5K2Positive4859492 - 486184987707.7
outer membrane chaperone skpASD21_16765Not AvailablePositive4861855 - 486249622495.8
udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferaseASD21_16770B0SZ11Positive4862543 - 486356834701.5
3-hydroxyacyl-acp dehydrataseASD21_16775B0SZ10Positive4863565 - 486404117458.3
udp-n-acetylglucosamine o-acyltransferaseASD21_16780Q9A715Positive4864038 - 486483228017.6
udp-2,3-diacylglucosamine pyrophosphataseASD21_16785Q9A716Positive4864842 - 486568429354.8

Displaying genes 4391 – 4400 of 4584 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

310 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da

Displaying 1–10 of 310 metabolites

Health Effects

No health effects information available for this bacterium.