Pelomonas sp. Root1444

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Sphaerotilaceae

Genus

Roseateles

Description

Pelomonas sp. Root1444 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This specific strain has been cataloged under the accession number LMFP00000000.1, which provides a reference for its genomic data. As a member of the Pelomonas genus, this organism is likely to exhibit traits typical of Gram-negative bacteria, such as a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides. These features may confer certain ecological advantages, including increased resistance to certain antibiotics and the ability to thrive in diverse environmental conditions. The single replicon indicates a streamlined genetic framework, which may facilitate efficient replication and adaptability to its surroundings. This characteristic can be particularly beneficial in various ecological niches where resource availability and environmental challenges fluctuate. Understanding the traits of Pelomonas sp. Root1444 enhances our knowledge of its potential roles in microbial communities, particularly in environments where it may interact with plants or other microorganisms. The ecological implications of its Gram-negative nature and rod shape suggest it could play a role in nutrient cycling or symbiotic relationships, though specific interactions require further investigation. The genomic data available from its accession could also be leveraged for future studies on functional capabilities, contributing to a deeper understanding of its ecological impact.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilySphaerotilaceae
GenusRoseateles
SpeciesPelomonas sp. Root1444
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pelomonas sp. Root1444 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

913620 bp

Thymine Count

910796 bp

Guanine Count

2019049 bp

Cytosine Count

2041324 bp

Genome Length

5887280 bp

Protein-coding Genes

5090 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar abc transporter permeaseASD35_23230Not AvailableNegative3296407 - 329741134012.9
glycoside hydrolaseASD35_23235Not AvailableNegative3297408 - 3300320107322.0
sugar abc transporter atp-binding proteinASD35_23240Not AvailableNegative3300346 - 330188755552.9
laci family transcriptional regulatorASD35_23245Not AvailableNegative3302346 - 330330234290.9
glycosyl hydrolaseASD35_23250Not AvailableNegative3303334 - 330571287264.6
endo-alpha-(1->5)-l-arabinanaseASD35_23255Not AvailableNegative3305715 - 330704646619.0
alpha-n-arabinofuranosidaseASD35_23260Not AvailableNegative3307440 - 330898156089.9
2,5-dioxovalerate dehydrogenaseASD35_23265Not AvailableNegative3309020 - 331060054345.2
dihydroxy-acid dehydrataseASD35_23270Not AvailableNegative3310616 - 331237062679.6
alpha-n-arabinofuranosidaseASD35_23275Not AvailableNegative3312499 - 331345536148.3

Displaying genes 2941 – 2950 of 5167 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.