Paenibacillus sp. Root52

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus sp. Root52 is characterized by having a single replicon, which indicates a streamlined genomic organization. The genome of this organism is cataloged under the accession LMFO00000000.1, providing a basis for further genetic and functional studies. Paenibacillus species are known for their diverse ecological roles, often found in various environments, including soil and plant rhizospheres. They are recognized for their potential beneficial interactions with plants, such as promoting plant growth and enhancing nutrient availability. This particular strain, Root52, may contribute to these interactions due to its genetic characteristics, although specific functional traits of Root52 are not detailed in the provided information. The presence of a single replicon in Paenibacillus sp. Root52 may suggest specific evolutionary adaptations that facilitate its survival and functionality in its ecological niche. The streamlined nature of its genome could allow for efficient replication and resource utilization, which is advantageous in competitive environments. In summary, Paenibacillus sp. Root52, with its single replicon and documented genome accession, represents a potentially significant player in its ecosystem. Its role in promoting plant health and growth could have important implications for agriculture and soil health, aligning with the broader ecological functions attributed to the Paenibacillus genus.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus sp. Root52
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus sp. Root52 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1852173 bp

Thymine Count

1826917 bp

Guanine Count

1518709 bp

Cytosine Count

1429817 bp

Genome Length

6628015 bp

Protein-coding Genes

5774 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methionine abc transporter atp-binding proteinASD24_17060Not AvailablePositive5892188 - 589322537804.8
metal abc transporter permeaseASD24_17065Not AvailablePositive5893206 - 589388624306.9
methionine abc transporter substrate-binding proteinASD24_17070Not AvailablePositive5893969 - 589480530224.9
hypothetical proteinASD24_17075Not AvailableNegative5894960 - 589596136998.1
3-ketoacyl-acp reductaseASD24_17080Not AvailablePositive5896283 - 589704727763.7
nitrogen fixation protein nifuASD24_17085Not AvailableNegative5897177 - 58974228785.49
udp-n-acetylmuramoylalanine--d-glutamate ligaseASD24_17090Not AvailablePositive5897503 - 58977579513.18
nadh dehydrogenaseASD24_17095Not AvailableNegative5897754 - 589881539189.9
aminofutalosine synthase mqneASD24_17100Not AvailableNegative5899114 - 590022041871.1
hypothetical proteinASD24_17105Not AvailablePositive5900781 - 590113712903.2

Displaying genes 5241 – 5250 of 5876 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.