Nocardia sp. Root136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Nocardia

Description

Nocardia sp. Root136 is a notable microbial organism characterized by the presence of flagella, which suggests it possesses motility capabilities potentially advantageous for its survival and ecological interactions. The organism has a single replicon, indicating a streamlined genomic structure that can influence its replication and overall biology. The sequence data for Nocardia sp. Root136 is cataloged under the accession LMFE00000000.1, providing a reference point for further studies and comparisons within the Nocardia genus. Ecologically, members of the Nocardia genus are known for their roles in soil environments, where they contribute to the decomposition of organic matter and nutrient cycling. Their flagellated nature may enhance their ability to navigate through soil matrices, allowing them to colonize diverse niches and interact with other microorganisms. This motility can be crucial in their adaptation to fluctuating environmental conditions, enabling them to exploit available resources efficiently. In summary, Nocardia sp. Root136's flagella presence and single replicon status provide insights into its potential ecological roles, particularly in soil ecosystems where mobility and adaptability are vital for survival and nutrient acquisition.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusNocardia
SpeciesNocardia sp. Root136
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardia sp. Root136


Gene Summary

Adenine Count

1203059 bp

Thymine Count

1177277 bp

Guanine Count

2423391 bp

Cytosine Count

2478989 bp

Genome Length

7282860 bp

Protein-coding Genes

6470 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cholesterol oxidaseASD42_24530Not AvailableNegative6077892 - 607952657227.3
hypothetical proteinASD42_24535Not AvailableNegative6079621 - 608038826086.0
2-isopropylmalate synthaseASD42_24540Not AvailablePositive6080687 - 608248365255.1
hypothetical proteinASD42_24545Not AvailablePositive6082828 - 608452260649.6
lysr family transcriptional regulatorASD42_24550Not AvailableNegative6084553 - 608545231999.7
hypothetical proteinASD42_24555Not AvailablePositive6085524 - 608645031970.2
fad-dependent oxidoreductaseASD42_24560Not AvailablePositive6086637 - 608839164115.7
udp-n-acetylmuramyl peptide synthaseASD42_24565Not AvailablePositive6088455 - 608969043450.8
glutamine amidotransferaseASD42_24570Not AvailablePositive6089687 - 609040325024.1
twitching motility protein piltASD42_24575Not AvailableNegative6090405 - 609077913967.7

Displaying genes 5451 – 5460 of 6526 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.