Nocardia sp. Root136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Nocardia

Description

Nocardia sp. Root136 is a notable microbial organism characterized by the presence of flagella, which suggests it possesses motility capabilities potentially advantageous for its survival and ecological interactions. The organism has a single replicon, indicating a streamlined genomic structure that can influence its replication and overall biology. The sequence data for Nocardia sp. Root136 is cataloged under the accession LMFE00000000.1, providing a reference point for further studies and comparisons within the Nocardia genus. Ecologically, members of the Nocardia genus are known for their roles in soil environments, where they contribute to the decomposition of organic matter and nutrient cycling. Their flagellated nature may enhance their ability to navigate through soil matrices, allowing them to colonize diverse niches and interact with other microorganisms. This motility can be crucial in their adaptation to fluctuating environmental conditions, enabling them to exploit available resources efficiently. In summary, Nocardia sp. Root136's flagella presence and single replicon status provide insights into its potential ecological roles, particularly in soil ecosystems where mobility and adaptability are vital for survival and nutrient acquisition.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusNocardia
SpeciesNocardia sp. Root136
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardia sp. Root136 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1203059 bp

Thymine Count

1177277 bp

Guanine Count

2423391 bp

Cytosine Count

2478989 bp

Genome Length

7282860 bp

Protein-coding Genes

6470 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transposaseASD42_31210Not AvailableNegative3283457 - 328470146000.2
transposaseASD42_31215Not AvailablePositive3284645 - 328494411154.5
nitrate abc transporter atp-binding proteinASD42_31220Not AvailablePositive3285002 - 328574526807.4
oxidoreductaseASD42_31225Not AvailablePositive3285742 - 328848097867.7
esteraseASD42_31230Not AvailablePositive3288726 - 328997644383.0
gnat family acetyltransferaseASD42_31235Not AvailableNegative3289995 - 329119143640.7
epimeraseASD42_31240Not AvailableNegative3291224 - 329180819886.6
hypothetical proteinASD42_31245Not AvailableNegative3291835 - 329213110104.5
hypothetical proteinASD42_31250Not AvailablePositive3292223 - 329255212191.6
luxr family transcriptional regulatorASD42_31255Not AvailableNegative3292624 - 329326821900.7

Displaying genes 2951 – 2960 of 6526 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.