Nocardia sp. Root136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Nocardia

Description

Nocardia sp. Root136 is a notable microbial organism characterized by the presence of flagella, which suggests it possesses motility capabilities potentially advantageous for its survival and ecological interactions. The organism has a single replicon, indicating a streamlined genomic structure that can influence its replication and overall biology. The sequence data for Nocardia sp. Root136 is cataloged under the accession LMFE00000000.1, providing a reference point for further studies and comparisons within the Nocardia genus. Ecologically, members of the Nocardia genus are known for their roles in soil environments, where they contribute to the decomposition of organic matter and nutrient cycling. Their flagellated nature may enhance their ability to navigate through soil matrices, allowing them to colonize diverse niches and interact with other microorganisms. This motility can be crucial in their adaptation to fluctuating environmental conditions, enabling them to exploit available resources efficiently. In summary, Nocardia sp. Root136's flagella presence and single replicon status provide insights into its potential ecological roles, particularly in soil ecosystems where mobility and adaptability are vital for survival and nutrient acquisition.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusNocardia
SpeciesNocardia sp. Root136
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardia sp. Root136


Gene Summary

Adenine Count

1203059 bp

Thymine Count

1177277 bp

Guanine Count

2423391 bp

Cytosine Count

2478989 bp

Genome Length

7282860 bp

Protein-coding Genes

6470 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
n-acetyl-1-d-myo-inositol-2-amino-2-deoxy-alpha- d-glucopyranoside deacetylaseASD42_10690Not AvailableNegative2311606 - 231248731108.7
monoacyl phosphatidylinositol tetramannoside-binding proteinASD42_10695Not AvailableNegative2312484 - 231425061302.8
gtp-binding protein typaASD42_10700Not AvailableNegative2314369 - 231631270114.0
hypothetical proteinASD42_10705Not AvailableNegative2316377 - 23165867960.95
pterin-4-alpha-carbinolamine dehydrataseASD42_10710Not AvailablePositive2316594 - 231688110193.0
alpha-(1-2)-phosphatidylinositol mannosyltransferaseASD42_10715Not AvailableNegative2316888 - 231811145126.8
hypothetical proteinASD42_10720Not AvailablePositive2318407 - 231918625436.7
hypothetical proteinASD42_10725Not AvailablePositive2319286 - 231963311878.9
hypothetical proteinASD42_10730Not AvailableNegative2319635 - 232034525388.6
hypothetical proteinASD42_10735Not AvailableNegative2320510 - 232165240644.5

Displaying genes 2101 – 2110 of 6526 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.