Nocardia sp. Root136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Nocardia

Description

Nocardia sp. Root136 is a notable microbial organism characterized by the presence of flagella, which suggests it possesses motility capabilities potentially advantageous for its survival and ecological interactions. The organism has a single replicon, indicating a streamlined genomic structure that can influence its replication and overall biology. The sequence data for Nocardia sp. Root136 is cataloged under the accession LMFE00000000.1, providing a reference point for further studies and comparisons within the Nocardia genus. Ecologically, members of the Nocardia genus are known for their roles in soil environments, where they contribute to the decomposition of organic matter and nutrient cycling. Their flagellated nature may enhance their ability to navigate through soil matrices, allowing them to colonize diverse niches and interact with other microorganisms. This motility can be crucial in their adaptation to fluctuating environmental conditions, enabling them to exploit available resources efficiently. In summary, Nocardia sp. Root136's flagella presence and single replicon status provide insights into its potential ecological roles, particularly in soil ecosystems where mobility and adaptability are vital for survival and nutrient acquisition.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusNocardia
SpeciesNocardia sp. Root136
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardia sp. Root136


Gene Summary

Adenine Count

1203059 bp

Thymine Count

1177277 bp

Guanine Count

2423391 bp

Cytosine Count

2478989 bp

Genome Length

7282860 bp

Protein-coding Genes

6470 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ectoine/hydroxyectoine abc transporter atp-binding protein ehuaASD42_06680Not AvailablePositive1431077 - 143183228097.2
hypothetical proteinASD42_06685Not AvailablePositive1431890 - 143263625976.3
bleomycin resistance proteinASD42_06690Not AvailableNegative1432626 - 143301814067.8
arsr family transcriptional regulatorASD42_06695Not AvailableNegative1433018 - 143329910599.6
lysr family transcriptional regulatorASD42_06700Not AvailableNegative1433375 - 143432233364.7
thiamine biosynthesis protein thijASD42_06705Not AvailablePositive1434373 - 143506223569.5
metal-dependent phosphohydrolaseASD42_06710Not AvailableNegative1435078 - 143571022619.6
nadp oxidoreductaseASD42_06715Not AvailableNegative1435838 - 143651223438.4
lysine transporter lyseASD42_06720Not AvailablePositive1436597 - 143723822190.7
pucr family transcriptional regulatorASD42_06725Not AvailableNegative1437286 - 143891157775.3

Displaying genes 1311 – 1320 of 6526 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.